Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 RNU1-132P-201ENST00000364300 164 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 Y_RNA.376-201ENST00000365638 108 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 MIR578-201ENST00000384828 96 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 MIR3065-201ENST00000390137 79 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 HSPE1P8-201ENST00000406997 288 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 BX842559.1-201ENST00000419615 532 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC004975.1-201ENST00000428733 208 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC006946.1-201ENST00000429106 328 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 ELOCP18-201ENST00000434209 337 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC073910.1-201ENST00000445047 438 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AL360271.2-201ENST00000447710 161 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC133473.1-201ENST00000455173 299 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AL445433.1-201ENST00000457507 257 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC011005.2-201ENST00000487324 359 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 RNU6-1095P-201ENST00000516148 108 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 TRAV8-5-201ENST00000537369 341 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 HSPE1P20-201ENST00000538133 289 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 TOMM20P2-201ENST00000540082 421 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC005951.2-201ENST00000576282 495 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 RN7SL176P-201ENST00000580352 264 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AL445567.2-201ENST00000618935 498 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 AC140479.6-201ENST00000633535 357 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 MIR4496-201ENST00000635896 61 ntBASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CHMP3Q9Y3E7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CHMP3Q9Y3E7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
CHMP3Q9Y3E7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CHMP3Q9Y3E7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AL138885.1-201ENST00000405921 675 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 MIR1302-6-201ENST00000408466 90 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 RNU6-174P-201ENST00000410406 106 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 RPS3AP12-201ENST00000443616 753 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 RNU7-169P-201ENST00000459456 61 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 FTH1P2-201ENST00000466086 412 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 RPL35AP15-201ENST00000468042 339 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 UQCRHP4-201ENST00000471686 272 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 VN1R104P-201ENST00000505115 1009 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 SNORA40.14-201ENST00000516543 86 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 RN7SKP258-201ENST00000517151 304 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 MRPL49P2-201ENST00000521066 465 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 TVP23BP1-201ENST00000557500 617 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AC079587.1-201ENST00000603846 277 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 AC023043.4-201ENST00000612081 449 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 SDR42E1P2-201ENST00000614861 481 ntBASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP3Q9Y3E7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 ZNF285B-201ENST00000561698 1767 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 MIR383-201ENST00000362257 73 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 Y_RNA.14-201ENST00000362415 103 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 RNA5SP479-201ENST00000364858 117 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 RNA5SP151-201ENST00000365632 117 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 Y_RNA.480-201ENST00000384364 102 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 Y_RNA.577-201ENST00000384794 101 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 AL445529.1-201ENST00000398713 389 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 SNORA11F-201ENST00000408237 128 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 RBMY1KP-201ENST00000423480 476 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 FO393415.2-201ENST00000480085 343 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 RNA5SP446-201ENST00000515955 82 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 SNORA31.3-201ENST00000516029 96 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 RNU6-397P-201ENST00000516226 104 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 AC090151.1-201ENST00000520784 730 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 AC126177.3-201ENST00000551839 688 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 AC006600.1-201ENST00000572529 153 ntBASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CHMP3Q9Y3E7 AL160281.1-201ENST00000605307 311 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms