Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC012443.1-201ENST00000605605 231 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL670379.7-201ENST00000605823 252 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 RNVU1-4-201ENST00000612985 164 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC004972.1-201ENST00000623934 2209 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL645937.1-201ENST00000641739 1652 ntBASIC3.9□□□□□ -1.78
SSX2IPQ9Y2D8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSX2IPQ9Y2D8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSX2IPQ9Y2D8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.9□□□□□ -1.78
SSX2IPQ9Y2D8 Y_RNA.61-201ENST00000362835 102 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-694P-201ENST00000364071 147 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 SNORA62.1-201ENST00000364287 154 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 RNA5SP267-201ENST00000364893 126 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 SNORD37.1-201ENST00000390968 65 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 MTCYBP8-201ENST00000422855 651 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AC004866.2-201ENST00000438285 481 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AC093019.1-201ENST00000443135 252 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 MTND1P18-201ENST00000448191 573 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 EIF4EP3-201ENST00000498782 656 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 MTND3P22-201ENST00000510932 243 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 SNORA74D-201ENST00000516404 141 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 RAB11AP2-201ENST00000545905 639 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AL121603.1-201ENST00000553815 142 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AL138976.2-201ENST00000563989 694 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 SNORD84-203ENST00000584275 78 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AP001029.3-201ENST00000588063 596 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AC010525.2-201ENST00000590920 195 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AL450472.3-201ENST00000615578 367 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AL355365.1-201ENST00000616480 294 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AC091953.5-201ENST00000622919 233 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 U6.114-201ENST00000636407 96 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AC119674.1-207ENST00000641355 633 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 OR4G1P-203ENST00000641984 1631 ntBASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX2IPQ9Y2D8 ZNF826P-207ENST00000622273 1910 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC092326.2-201ENST00000624772 1561 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 SNORD9-201ENST00000362566 104 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 Y_RNA.263-201ENST00000364659 114 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RNVU1-14-201ENST00000384770 164 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RNU2-29P-201ENST00000410423 189 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RPL21P109-201ENST00000422213 475 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RAC1P6-201ENST00000423911 575 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 SRIP2-201ENST00000428470 166 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC097713.2-201ENST00000430199 356 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RPS29P15-201ENST00000458329 171 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RN7SL601P-201ENST00000471221 293 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RN7SL432P-201ENST00000484057 298 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RN7SKP219-201ENST00000516825 296 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RNA5SP503-201ENST00000517047 117 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 SUB1P1-201ENST00000524415 382 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 OR5B19P-201ENST00000531766 928 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 OR5AL2P-201ENST00000532185 920 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC125611.2-201ENST00000551907 647 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC010928.3-201ENST00000587712 541 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AF038458.1-201ENST00000588406 262 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AL117336.2-201ENST00000602435 335 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 HMGN2P28-201ENST00000606102 262 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AP001486.3-201ENST00000615334 372 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 AC048347.1-201ENST00000624621 427 ntBASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX2IPQ9Y2D8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms