Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC092902.1-201ENST00000486999 259 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC008628.1-201ENST00000508663 265 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 RNY4P37-201ENST00000516225 96 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AP005902.1-201ENST00000521358 186 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 OR6C7P-201ENST00000547875 934 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 BBIP1P1-201ENST00000602999 279 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC025588.2-201ENST00000604851 466 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC120053.1-201ENST00000607706 736 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC010133.1-201ENST00000615809 842 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AL356094.1-201ENST00000624663 1212 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC019226.1-201ENST00000625666 515 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 U2.21-201ENST00000637295 81 ntBASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HHLA3Q9XRX5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 RNU6-97P-201ENST00000363387 104 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 snoZ40.1-201ENST00000364540 72 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 SNORA16B-201ENST00000364674 135 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 RNU6-754P-201ENST00000391166 107 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 RN7SKP32-201ENST00000410167 303 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 ZNF90P2-204ENST00000419323 1075 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 USP9YP21-201ENST00000420603 432 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 PTP4A1P7-201ENST00000423476 514 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 HMGN2P19-201ENST00000425149 265 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL139415.2-201ENST00000431968 163 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 MICF-203ENST00000432679 129 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 FAM103A2P-201ENST00000444122 354 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC096638.1-201ENST00000444678 216 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 SNORA59A-201ENST00000459326 152 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC021382.1-201ENST00000483523 359 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 RPL23AP41-201ENST00000484754 458 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC068781.1-201ENST00000488231 618 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC096571.1-202ENST00000506634 735 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 SCARNA3-201ENST00000517097 143 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 MIR4513-201ENST00000581077 86 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL353997.4-201ENST00000586196 166 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL391813.1-201ENST00000603098 260 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL357094.1-201ENST00000603845 844 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL450336.1-201ENST00000605180 586 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AL021997.1-201ENST00000605757 193 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 AC010378.1-201ENST00000619270 362 ntBASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HHLA3Q9XRX5 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC110491.1-201ENST00000562191 2010 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 RNU6-778P-201ENST00000363269 103 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 TXNP7-201ENST00000406296 293 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 SNORA3.2-201ENST00000408221 125 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 RNU6-516P-201ENST00000411381 104 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC013262.1-201ENST00000426710 252 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 SNRPEP9-201ENST00000436794 238 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AL451074.3-201ENST00000437709 472 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC098831.1-201ENST00000440661 216 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 MTND5P14-201ENST00000441481 1267 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 MTND1P31-201ENST00000449206 961 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 TRBV1-201ENST00000476502 284 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC072039.1-201ENST00000477611 581 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 HMGB1P36-201ENST00000487709 576 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AL160314.1-201ENST00000490836 438 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms