Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AL359273.1-201ENST00000510918 627 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 RNA5SP468-201ENST00000516782 93 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 MIR4293-201ENST00000584305 78 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 BDH2P1-201ENST00000602288 736 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AP000860.1-201ENST00000605250 559 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC004492.1-201ENST00000607036 742 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC103710.2-201ENST00000609912 942 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AC010733.2-201ENST00000589496 5702 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 AL365361.1-201ENST00000566942 3481 ntBASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.6□□□□□ -1.83
HDAC6Q9UBN7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 CR848007.1-201ENST00000442354 1699 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 RNU5A-1-201ENST00000362698 116 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 RNU6-181P-201ENST00000363225 107 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 SNORA80A-201ENST00000363922 136 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AL359634.1-202ENST00000404721 284 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 RNU4-55P-201ENST00000410731 137 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 MED13P1-201ENST00000428342 171 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 HMGN2P16-201ENST00000456802 261 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 RPL23AP67-201ENST00000465341 474 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 HSPE1P6-201ENST00000479457 291 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC114797.1-201ENST00000514003 728 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 RNU6-445P-201ENST00000516949 107 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 SNORA31.22-201ENST00000517204 135 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 FAM60DP-201ENST00000524174 632 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AP003034.1-201ENST00000534621 422 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC022080.3-201ENST00000544433 482 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 MIR2682-201ENST00000580305 110 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AP001330.4-201ENST00000604350 154 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 uc_338.1-201ENST00000612113 180 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 SDR42E1P2-201ENST00000614861 481 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 U6atac.1-201ENST00000616025 117 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AL158209.2-201ENST00000619266 216 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC124864.2-201ENST00000624736 186 ntBASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HDAC6Q9UBN7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HDAC6Q9UBN7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.59□□□□□ -1.84
HDAC6Q9UBN7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HDAC6Q9UBN7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC073343.1-201ENST00000328239 651 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 RNU6-169P-201ENST00000365336 107 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 SNORA44-201ENST00000384584 132 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC007283.2-201ENST00000424739 197 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC008850.1-201ENST00000427546 362 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AL356867.1-201ENST00000429623 299 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 MTCO2P11-201ENST00000431069 680 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC236972.1-201ENST00000433225 199 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC002486.1-201ENST00000435098 391 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 RPS26P21-201ENST00000475397 348 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 RN7SL432P-201ENST00000484057 298 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC006483.1-201ENST00000487308 313 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 MTND1P5-201ENST00000517906 940 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 MED28P6-201ENST00000558776 231 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC107294.3-201ENST00000609211 526 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC007684.1-201ENST00000609671 477 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC010133.1-201ENST00000615809 842 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC009161.2-201ENST00000624626 138 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AL136313.1-201ENST00000624804 202 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC068137.3-201ENST00000639191 341 ntBASIC3.58□□□□□ -1.84
HDAC6Q9UBN7 AC073869.6-201ENST00000640656 341 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms