Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC008725.1-201ENST00000605123 2263 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC004972.1-201ENST00000623934 2209 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 RNU6-1029P-201ENST00000384109 107 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 HSPE1P26-201ENST00000405341 275 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 RNU2-37P-201ENST00000410695 177 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 AL109913.1-201ENST00000421173 514 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 GTF2IP20-201ENST00000431663 360 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 RPS29P31-201ENST00000446147 164 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 DPPA3P1-201ENST00000448050 469 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 NFU1P2-201ENST00000448700 469 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 RN7SL807P-201ENST00000470923 297 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 RPL32P34-201ENST00000486380 400 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 PHBP14-201ENST00000512887 367 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 SNORD60.2-201ENST00000516883 86 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 RN7SKP289-201ENST00000517244 295 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 OR5B19P-201ENST00000531766 928 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC106900.2-201ENST00000604994 317 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC007619.2-201ENST00000605743 379 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC008945.2-201ENST00000606056 604 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC034102.8-201ENST00000615146 484 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 AL359547.2-201ENST00000615810 418 ntBASIC3.85□□□□□ -1.79
COL20A1Q9P218 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
COL20A1Q9P218 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL20A1Q9P218 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL20A1Q9P218 AC103710.2-202ENST00000641454 2853 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL20A1Q9P218 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.84□□□□□ -1.79
COL20A1Q9P218 RNU6-1287P-201ENST00000362914 107 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 RNY3P3-201ENST00000363816 102 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 SNORD115-7-201ENST00000365306 82 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 RNU6-1060P-201ENST00000384664 107 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 MIR483-201ENST00000385070 76 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AL357075.1-201ENST00000404107 726 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.84□□□□□ -1.79
COL20A1Q9P218 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.84□□□□□ -1.79
COL20A1Q9P218 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL20A1Q9P218 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.84□□□□□ -1.79
COL20A1Q9P218 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.84□□□□□ -1.79
COL20A1Q9P218 RPS20P22-201ENST00000473700 357 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AC233702.1-201ENST00000482905 502 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 RN7SL504P-201ENST00000494496 287 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AC116353.2-201ENST00000505332 712 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AC104806.1-201ENST00000508720 308 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 PCBP2P3-201ENST00000509726 843 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL20A1Q9P218 RNA5SP401-201ENST00000515920 127 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 RNA5SP291-201ENST00000517222 105 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.84□□□□□ -1.79
COL20A1Q9P218 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.84□□□□□ -1.79
COL20A1Q9P218 MIR4703-201ENST00000577728 79 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AC011155.2-201ENST00000623202 216 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.84□□□□□ -1.79
COL20A1Q9P218 MTND5P42-201ENST00000637720 498 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL20A1Q9P218 MTND4P14-201ENST00000435799 1354 ntBASIC3.84□□□□□ -1.79
COL20A1Q9P218 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.8
COL20A1Q9P218 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL20A1Q9P218 HSPA8P1-201ENST00000425843 1833 ntBASIC3.84□□□□□ -1.8
COL20A1Q9P218 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 Y_RNA.38-201ENST00000362617 102 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 Y_RNA.576-201ENST00000384781 102 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 SNORD37.1-201ENST00000390968 65 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AL138878.1-201ENST00000405131 347 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 RNA5SP118-201ENST00000410385 109 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 MTND4P25-201ENST00000441039 533 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC073415.1-201ENST00000449240 153 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 CACYBPP2-201ENST00000453625 678 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 RPL31P60-201ENST00000478450 367 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 RNU6-1256P-201ENST00000516539 103 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 RNA5SP309-201ENST00000516670 106 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 RN7SKP219-201ENST00000516825 296 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms