Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 RPL17P12-201ENST00000413391 526 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 RPL21P24-201ENST00000413752 448 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AC244035.1-201ENST00000430042 390 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 MTATP6P30-201ENST00000443540 664 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AL513328.1-201ENST00000446460 224 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AL031313.1-201ENST00000448435 256 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AP001646.1-201ENST00000527936 915 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 RPS15AP11-201ENST00000594193 385 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AC004908.2-201ENST00000609090 574 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AC097655.1-201ENST00000635075 318 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 MTND4P9-201ENST00000507819 1346 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 MTND5P33-201ENST00000571250 1450 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 RNA5SP456-201ENST00000364002 114 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 RNU4-68P-201ENST00000364314 141 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 RNU1-73P-201ENST00000383971 164 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 SNORA41-201ENST00000384675 132 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 RNU6-220P-201ENST00000390919 107 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 BTF3L4P3-201ENST00000418879 476 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AL354692.1-201ENST00000423044 315 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 TXNL1P1-201ENST00000429528 554 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC098826.1-201ENST00000433943 471 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 ELOCP30-201ENST00000447108 299 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 EXOSC3P1-201ENST00000448649 500 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 CECR9-201ENST00000453421 199 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC008413.1-201ENST00000511864 177 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 MTCO2P15-201ENST00000532655 656 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC007115.1-201ENST00000546853 234 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC093012.1-202ENST00000549403 582 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 NACAP3-201ENST00000552100 481 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC025588.2-201ENST00000604851 466 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AC112220.3-201ENST00000605502 502 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 AP000776.1-201ENST00000530032 1663 ntBASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
KLHL28Q9NXS3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 RNU4-92P-201ENST00000363783 136 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 SNORA25.6-201ENST00000364121 118 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 SNORD114-30-201ENST00000364448 72 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 MIR19A-201ENST00000384878 82 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AL359704.1-201ENST00000411586 781 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 RPL26P27-201ENST00000414397 437 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 OOSP1P1-201ENST00000423265 274 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 MYL8P-204ENST00000431574 518 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 MTCO2P20-201ENST00000437339 673 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 RPS3P1-201ENST00000456781 192 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 RNU7-59P-201ENST00000459101 61 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 RPL23AP45-201ENST00000476406 468 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 TRBV12-1-201ENST00000479785 344 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC134050.1-201ENST00000495088 933 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 RN7SKP258-201ENST00000517151 304 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC009127.3-201ENST00000570531 403 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC022662.1-201ENST00000580252 331 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 SNORD14A-201ENST00000606526 91 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC112204.3-201ENST00000623822 332 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 AC010608.3-201ENST00000625048 527 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 MIR203B-201ENST00000636080 86 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms