Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC005951.2-201ENST00000576282 495 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 MIR4293-201ENST00000584305 78 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 NRBF2P1-201ENST00000587407 859 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC245014.2-201ENST00000603689 287 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC080078.2-201ENST00000603766 501 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AL022154.1-201ENST00000604698 785 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC246785.4-201ENST00000605374 287 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC069200.1-201ENST00000609511 323 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC103710.2-201ENST00000609912 942 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC099654.12-201ENST00000639868 649 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.84□□□□□ -1.96
NDE1Q9NXR1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
NDE1Q9NXR1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
NDE1Q9NXR1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.84□□□□□ -1.96
NDE1Q9NXR1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
NDE1Q9NXR1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.84□□□□□ -1.96
NDE1Q9NXR1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 SNORA14A-201ENST00000364773 135 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 MIR512-1-201ENST00000384913 84 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 MIR483-201ENST00000385070 76 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 U3.42-201ENST00000408746 214 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 MIR1289-1-201ENST00000408836 144 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 RPL21P24-201ENST00000413752 448 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 MTND3P17-201ENST00000416968 344 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 ATG3P1-201ENST00000419507 911 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 YPEL5P1-201ENST00000419731 367 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC093106.2-201ENST00000428212 385 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AL121871.1-201ENST00000443413 436 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AP000705.1-201ENST00000454567 350 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 C1DP4-201ENST00000455429 424 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 RPL23AP31-201ENST00000456160 467 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AL359385.1-201ENST00000456509 365 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC008481.1-201ENST00000463278 396 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 SRRM1P2-201ENST00000464531 1192 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC109925.1-201ENST00000478069 331 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC004924.1-201ENST00000480160 781 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC107401.1-201ENST00000503426 685 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AF038458.1-201ENST00000588406 262 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AP000787.2-201ENST00000604432 568 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AF250324.2-201ENST00000608299 610 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC093838.1-201ENST00000613014 469 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AL355365.1-201ENST00000616480 294 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC012314.7-201ENST00000619693 93 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC007318.2-201ENST00000620999 243 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 AC068792.1-201ENST00000621354 417 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 DDX10P1-201ENST00000448545 1933 ntBASIC2.83□□□□□ -1.96
NDE1Q9NXR1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NDE1Q9NXR1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 RNU6-173P-201ENST00000364215 104 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 RNU6-76P-201ENST00000384060 104 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 SNORD67-201ENST00000390833 111 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 RNU2-36P-201ENST00000410361 191 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 RNU2-8P-201ENST00000410727 190 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC063979.1-201ENST00000415539 377 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 SYF2P2-201ENST00000417620 583 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC133104.1-201ENST00000429100 218 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 RPL23AP30-201ENST00000432419 501 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 UBBP3-201ENST00000445497 241 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AL049714.1-201ENST00000466686 347 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC010631.1-201ENST00000474150 156 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms