Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC025423.5-201ENST00000550230 219 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 AL161713.1-201ENST00000555538 145 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 AL670379.6-201ENST00000603753 252 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 AL670379.1-201ENST00000604752 252 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 AL160290.3-201ENST00000604869 165 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 AL670379.5-201ENST00000605253 252 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 AL670379.8-201ENST00000605353 252 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 AL670379.7-201ENST00000605823 252 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 U2.1-201ENST00000618978 145 ntBASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PARPBPQ9NWS1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 Y_RNA.2-201ENST00000362330 96 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RNU6-99P-201ENST00000364721 107 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 Y_RNA.396-201ENST00000383949 103 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 SNORA56-201ENST00000383966 129 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RNU6-128P-201ENST00000383976 107 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RNU6-842P-201ENST00000384269 107 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RNU6-434P-201ENST00000384376 107 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RNU6-14P-201ENST00000384630 106 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 MIR135A2-201ENST00000384854 100 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 MT-TC-201ENST00000387405 66 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RNU6-823P-201ENST00000391042 103 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RNU6-1109P-201ENST00000391187 107 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 CYCSP43-201ENST00000438233 310 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 RPL23AP81-201ENST00000455252 467 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 HMGB3P30-201ENST00000457863 606 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 SNORD5.1-201ENST00000458800 75 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 MRPS35P2-201ENST00000508242 191 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 PARP4P3-201ENST00000510265 317 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 SNORD116.3-201ENST00000517176 78 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AC100770.1-201ENST00000532310 322 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AC005357.1-201ENST00000588399 301 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AC012669.1-201ENST00000603209 283 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AL031176.1-201ENST00000604554 466 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 AL161423.1-201ENST00000613700 262 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 HMGB1P24-202ENST00000615653 685 ntBASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PARPBPQ9NWS1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 SNORD62.1-201ENST00000362541 86 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 Y_RNA.428-201ENST00000384078 102 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 U3.22-201ENST00000391120 215 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AL732292.1-201ENST00000426692 226 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AL158071.1-201ENST00000430315 461 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AC009963.2-201ENST00000453431 138 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AC234775.1-201ENST00000454247 670 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AL353752.1-201ENST00000454946 260 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AC116655.1-201ENST00000508324 901 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AC092436.3-201ENST00000511788 257 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 RNU6-390P-201ENST00000516259 103 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 RNA5SP73-201ENST00000516744 108 ntBASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PARPBPQ9NWS1 AC026371.1-201ENST00000551867 419 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms