Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.94□□□□□ -1.78
TDP1Q9NUW8 AC026464.5-201ENST00000562497 722 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 AC106782.4-201ENST00000568264 210 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 AC002545.1-201ENST00000592511 181 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.94□□□□□ -1.78
TDP1Q9NUW8 AC243960.4-201ENST00000600532 288 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 AC092747.3-201ENST00000603769 301 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 RNU1-30P-201ENST00000606575 163 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 MIR15A-201ENST00000607334 83 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 AP002826.1-201ENST00000608835 315 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 AC084757.4-201ENST00000616350 526 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 TPTEP1-208ENST00000636884 213 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
TDP1Q9NUW8 AC121333.1-201ENST00000567488 2709 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TDP1Q9NUW8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TDP1Q9NUW8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.94□□□□□ -1.78
TDP1Q9NUW8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.94□□□□□ -1.78
TDP1Q9NUW8 USP8P1-201ENST00000494673 3183 ntBASIC3.94□□□□□ -1.78
TDP1Q9NUW8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC007685.1-201ENST00000329806 452 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 RNA5SP387-201ENST00000364226 106 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 SNORA51.2-201ENST00000364595 132 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 Y_RNA.813-201ENST00000364639 102 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 RNA5SP189-201ENST00000364920 115 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 RNU6-715P-201ENST00000365204 103 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 RHOT1P2-201ENST00000366423 333 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 SNORA16.2-201ENST00000390991 127 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 RPS29P4-201ENST00000414733 161 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 USP9YP20-201ENST00000419224 558 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 CYP4F29P-201ENST00000420685 446 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AL160275.3-201ENST00000423876 471 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 HMGN2P31-201ENST00000432430 273 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 HSPD1P21-201ENST00000436541 245 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC106707.2-201ENST00000484182 374 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC104619.4-201ENST00000510773 249 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC023141.12-201ENST00000512399 199 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 SNORA70.16-201ENST00000516390 95 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AP001804.3-201ENST00000525146 880 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 GLYCAM1-201ENST00000546596 285 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC011611.1-201ENST00000552179 197 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC005668.1-201ENST00000571142 476 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC005498.1-201ENST00000592125 465 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC008638.3-201ENST00000603341 463 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 DUSP12P1-201ENST00000612874 516 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC012314.7-201ENST00000619693 93 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 RMST_9.1-201ENST00000619945 193 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 RMST_7.1-201ENST00000621935 268 ntBASIC3.93□□□□□ -1.78
TDP1Q9NUW8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.93□□□□□ -1.78
TDP1Q9NUW8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 UBE2L2-201ENST00000254302 429 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 Y_RNA.184-201ENST00000363884 108 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 RNA5SP167-201ENST00000365461 116 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 Y_RNA.414-201ENST00000384011 101 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 Y_RNA.535-201ENST00000384612 99 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 MIR93-201ENST00000385024 80 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 SNORA11.1-201ENST00000408133 129 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 BX682237.1-201ENST00000415016 335 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 BTF3L4P3-201ENST00000418879 476 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 BX842559.1-201ENST00000419615 532 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 NDUFB4P7-201ENST00000423198 363 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 RPL27AP8-201ENST00000424277 446 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 AL669831.1-202ENST00000428504 417 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 FTH1P6-201ENST00000430768 320 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 GTF2IP13-201ENST00000438487 386 ntBASIC3.92□□□□□ -1.78
TDP1Q9NUW8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.92□□□□□ -1.78
TDP1Q9NUW8 PPP1R2P5-201ENST00000457256 603 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms