Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC008264.1-201ENST00000447612 367 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC093392.2-201ENST00000450682 337 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AL356010.1-201ENST00000456364 102 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 TRMT10BP1-201ENST00000519377 943 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 DEFB131E-202ENST00000602581 683 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC024220.1-201ENST00000603675 484 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 BNIP3P9-201ENST00000603714 553 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AP001330.5-201ENST00000607176 411 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 CR381653.2-201ENST00000624041 768 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AL157786.1-207ENST00000627771 695 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 SEPT14P19-203ENST00000633205 211 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 U6.114-201ENST00000636407 96 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC103710.2-202ENST00000641454 2853 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 Y_RNA.6-201ENST00000362350 114 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 Y_RNA.534-201ENST00000384599 112 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 MIR181A1-201ENST00000385026 110 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 RPL17P50-201ENST00000396131 546 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 CALM2P3-201ENST00000400429 449 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AL031779.1-201ENST00000415663 330 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC006946.1-201ENST00000429106 328 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC027673.1-201ENST00000456245 405 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 SRRM1P2-201ENST00000464531 1192 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC025518.1-201ENST00000479856 347 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC098591.2-201ENST00000510152 315 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 SNORA31.1-201ENST00000515993 133 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-123P-201ENST00000516163 102 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 SNORA31.5-201ENST00000516190 133 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-314P-201ENST00000516574 104 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AP003033.1-201ENST00000527244 415 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 ADI1P3-201ENST00000549509 470 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 ZNF519P2-201ENST00000557032 169 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 TPRKBP2-201ENST00000565969 475 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 MIR4775-201ENST00000581168 75 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC068792.1-201ENST00000621354 417 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC139792.3-201ENST00000623525 224 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC012442.3-202ENST00000636742 206 ntBASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC6A13Q9NSD5 AL356274.2-201ENST00000624379 3752 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 FTLP6-201ENST00000355274 422 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 SNORA71.3-201ENST00000362582 128 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-270P-201ENST00000364131 105 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 SNORD115-7-201ENST00000365306 82 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 Y_RNA.576-201ENST00000384781 102 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 MIR23A-201ENST00000385245 73 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC068050.1-201ENST00000394891 380 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 UBE2V1P10-201ENST00000414685 269 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 SYF2P2-201ENST00000417620 583 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 CALM2P2-201ENST00000428512 440 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AL592045.1-201ENST00000429867 352 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RNU7-63P-201ENST00000459054 62 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RPL23AP67-201ENST00000465341 474 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC019235.1-201ENST00000503847 207 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 HMGN1P11-201ENST00000508668 303 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC009646.1-201ENST00000510455 318 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC104619.4-201ENST00000510773 249 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-914P-201ENST00000516749 109 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms