Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SNORA9-201ENST00000384215 133 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 SNORA36C-201ENST00000384289 132 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 RNU6-39P-201ENST00000384344 107 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AL078595.1-201ENST00000404458 226 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AL353193.1-201ENST00000421444 268 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 NDUFB4P6-201ENST00000436819 366 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 HMGN2P20-201ENST00000437531 273 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 MTATP6P23-201ENST00000440153 476 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 BNIP3P2-201ENST00000441221 577 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 WASF1P1-201ENST00000447560 1131 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 RN7SL601P-201ENST00000471221 293 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 RPL7P5-201ENST00000471472 736 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 RPL31P60-201ENST00000478450 367 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 RPS4XP22-201ENST00000480755 780 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 FCF1P3-201ENST00000496394 590 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC116353.2-201ENST00000505332 712 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 RNU6-1281P-201ENST00000516223 105 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 RNU2-10P-201ENST00000516375 211 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 RNU7-51P-201ENST00000516560 62 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 MTND1P35-201ENST00000526739 508 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC128657.1-201ENST00000549459 145 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AL359212.1-201ENST00000556608 614 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AC103710.2-201ENST00000609912 942 ntBASIC3.22□□□□□ -1.89
KLHL1Q9NR64 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.22□□□□□ -1.89
KLHL1Q9NR64 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
KLHL1Q9NR64 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.89
KLHL1Q9NR64 AC008568.2-201ENST00000623862 2313 ntBASIC3.21□□□□□ -1.89
KLHL1Q9NR64 CUL1P1-201ENST00000509510 2425 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 RNU6-1120P-201ENST00000362988 108 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 RNU1-33P-201ENST00000364249 162 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 RNU6-1322P-201ENST00000364309 107 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 Y_RNA.295-201ENST00000364918 102 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 Y_RNA.381-201ENST00000365666 102 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 SNORD17-201ENST00000390930 237 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC068050.1-201ENST00000394891 380 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 MIR1290-201ENST00000408735 78 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 RNU6-55P-201ENST00000411092 107 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 RNU6-954P-201ENST00000411355 107 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 RPL21P24-201ENST00000413752 448 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 SNRPEP4-201ENST00000435815 279 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 RBMY2UP-201ENST00000453474 324 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 RNU2-27P-201ENST00000516185 142 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 SNORA74D-201ENST00000516404 141 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC123904.3-201ENST00000547218 814 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC025449.1-201ENST00000603896 529 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC007621.1-201ENST00000604544 437 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC002076.2-201ENST00000617362 122 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 MIR4275-201ENST00000636486 87 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 MIR1321-201ENST00000637766 79 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.21□□□□□ -1.9
KLHL1Q9NR64 AC068647.1-201ENST00000489539 2265 ntBASIC3.21□□□□□ -1.9
KLHL1Q9NR64 SDAD1P2-201ENST00000441308 2028 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 CR848007.1-201ENST00000442354 1699 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 HSPE1P11-201ENST00000339579 310 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 RNU6-877P-201ENST00000383868 107 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 RNU1-39P-201ENST00000383897 165 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 RNU6-641P-201ENST00000384006 107 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 MIR1-2-201ENST00000384961 85 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 U3.39-201ENST00000408569 239 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 Y_RNA.604-201ENST00000410574 102 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC005094.1-201ENST00000440420 368 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms