Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 ATP5A1P2-202ENST00000616464 443 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 PISRT1.1-201ENST00000616930 107 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 AC110801.1-201ENST00000623590 212 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 AL034408.1-202ENST00000636088 415 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 PNPT1P2-201ENST00000456768 2050 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 AC073346.2-201ENST00000624724 2058 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 AC000123.3-201ENST00000624029 4975 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.364-201ENST00000365532 101 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 SNORA5A-201ENST00000384111 134 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.463-201ENST00000384271 102 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.473-201ENST00000384333 102 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 U8.11-201ENST00000384699 133 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 U8.12-201ENST00000384701 133 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 PTMAP5-201ENST00000393073 333 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 RPL7P10-201ENST00000417407 739 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AL162389.1-201ENST00000449233 177 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 U8.18-201ENST00000459285 133 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AC010631.1-201ENST00000474150 156 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AP001086.1-201ENST00000494882 321 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 MIR3941-201ENST00000582572 103 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 BNIP3P16-201ENST00000589779 534 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AL158032.1-201ENST00000605401 106 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AC011890.2-201ENST00000613393 294 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 AC015967.1-201ENST00000619893 476 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 MIR7702-201ENST00000621931 59 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 FP236240.3-201ENST00000623061 327 ntBASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM7Q9NR12 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AC092435.4-201ENST00000623012 4159 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.47-201ENST00000362697 108 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 SNORD3E-201ENST00000362899 217 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.149-201ENST00000363558 117 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.399-201ENST00000383955 105 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 RNU6-393P-201ENST00000384475 107 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 MIR30B-201ENST00000384850 88 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 RNA5SP111-201ENST00000411386 101 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 RPLP0P7-201ENST00000416050 667 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 EI24P1-201ENST00000416584 867 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AL391219.1-201ENST00000422570 483 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 NUP35P1-201ENST00000422734 947 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AL590632.1-201ENST00000424289 371 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 MRPS18BP2-201ENST00000434310 759 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 TBCAP1-201ENST00000436520 327 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AL731563.1-201ENST00000442202 214 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 MTCO3P45-201ENST00000443036 613 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 NDUFS5P3-201ENST00000450668 321 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AC017037.1-201ENST00000508460 471 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AC116337.1-201ENST00000509680 687 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 SNORA14.1-201ENST00000516113 141 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 RNU6-1069P-201ENST00000516612 133 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AC009229.3-201ENST00000608056 282 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AC006157.1-201ENST00000611750 366 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 U4.1-201ENST00000620349 87 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AL162373.1-201ENST00000620433 407 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 PLCE1P1-201ENST00000622094 305 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AL732372.2-225ENST00000642124 456 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms