Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AP003072.2-201ENST00000527756 676 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC087883.1-201ENST00000551882 391 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC125611.2-201ENST00000551907 647 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AL845331.3-202ENST00000562856 261 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 MIR3162-201ENST00000581818 82 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 MIR98-201ENST00000606724 119 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC004067.1-201ENST00000608733 700 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.85
DDX4Q9NQI0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AL353746.1-201ENST00000566293 6881 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 RNU6-1284P-201ENST00000363701 100 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 RNU6-76P-201ENST00000384060 104 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 SAR1AP2-201ENST00000392696 594 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 RNA5SP107-201ENST00000411358 122 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 UBE2FP1-201ENST00000416536 447 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 MTATP6P4-201ENST00000427725 675 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 C8orf59P1-201ENST00000429930 303 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC024082.2-201ENST00000434771 238 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 C1DP4-201ENST00000455429 424 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 RPL23AP31-201ENST00000456160 467 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC008481.1-201ENST00000463278 396 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 RPL9P33-201ENST00000484311 566 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 RPS15AP36-201ENST00000492022 382 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 RNU2-10P-201ENST00000516375 211 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 RNU6-64P-201ENST00000517119 105 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 ERHP1-201ENST00000523006 310 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 SNRPGP16-201ENST00000533275 226 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 HMGB1P6-201ENST00000569046 646 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC024153.1-201ENST00000603103 365 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC006338.1-201ENST00000618453 749 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC026585.1-201ENST00000619582 524 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC068792.1-201ENST00000621354 417 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC006111.3-201ENST00000622137 383 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 FRG1KP-201ENST00000623592 341 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC068880.5-201ENST00000624331 290 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 SDAD1P2-201ENST00000441308 2028 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC096644.4-201ENST00000563417 2912 ntBASIC3.46□□□□□ -1.86
DDX4Q9NQI0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
DDX4Q9NQI0 AC110774.1-201ENST00000623567 2018 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 HSPE1P11-201ENST00000339579 310 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AC062016.1-201ENST00000355719 319 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 MIR449A-201ENST00000362113 91 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 Y_RNA.41-201ENST00000362646 102 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 RPL21P24-201ENST00000413752 448 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AL049714.1-201ENST00000466686 347 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AC006483.1-201ENST00000487308 313 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 SNORA64.4-201ENST00000516632 81 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AP001804.3-201ENST00000525146 880 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AC022690.1-201ENST00000526681 550 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 ZNF519P2-201ENST00000557032 169 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AP003465.2-201ENST00000602571 373 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AL021997.1-201ENST00000605757 193 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AC004492.1-201ENST00000607036 742 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AC013476.2-201ENST00000614456 459 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
DDX4Q9NQI0 SNHG22-203ENST00000617833 660 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms