Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MTCO3P45-201ENST00000443036 613 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 SNRPGP5-201ENST00000456003 220 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AC103975.1-201ENST00000482506 483 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 ARL4AP2-201ENST00000507378 601 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 SCARNA24.1-201ENST00000516465 137 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 SCARNA13-201ENST00000516672 275 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 H3F3AP1-201ENST00000559984 334 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AC004067.1-201ENST00000608733 700 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AC069234.5-201ENST00000611056 416 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AC000403.1-201ENST00000613696 3585 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 ELF2P3-201ENST00000445099 1506 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.03□□□□□ -1.93
SIX2Q9NPC8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.03□□□□□ -1.93
SIX2Q9NPC8 AC009812.4-201ENST00000569134 1805 ntBASIC3.03□□□□□ -1.93
SIX2Q9NPC8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 HSPE1P11-201ENST00000339579 310 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 SNORD46.1-201ENST00000364139 104 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 Y_RNA.372-201ENST00000365599 102 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 SNORA18.3-201ENST00000384122 132 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 RNU6-39P-201ENST00000384344 107 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 RNU6-456P-201ENST00000384493 107 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 RNU6-851P-201ENST00000384565 107 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 RPL21P24-201ENST00000413752 448 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 RPL35AP12-201ENST00000425362 338 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 MTATP6P4-201ENST00000427725 675 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 RPL23AP30-201ENST00000432419 501 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC024082.2-201ENST00000434771 238 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AL513043.1-201ENST00000439124 535 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC008481.1-201ENST00000463278 396 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC083906.5-201ENST00000503722 328 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 KLHL2P1-201ENST00000508691 521 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC009646.1-201ENST00000510455 318 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 SNORA31.22-201ENST00000517204 135 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC100870.1-201ENST00000522035 505 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC109635.4-202ENST00000531666 412 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 HPRT1P3-201ENST00000539521 576 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC123904.3-201ENST00000547218 814 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC128657.1-201ENST00000549459 145 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 CYCSP39-201ENST00000565821 309 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC006270.2-201ENST00000578523 652 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 MIR3944-201ENST00000581277 108 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 MIR5195-201ENST00000583555 115 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 GLUD1P4-201ENST00000590914 418 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC024153.1-201ENST00000603103 365 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC017083.3-201ENST00000609955 700 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AL360181.4-201ENST00000621752 134 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC009161.2-201ENST00000624626 138 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 MIR4275-201ENST00000636486 87 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AC138649.5-201ENST00000637456 137 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AP001350.1-201ENST00000601906 1524 ntBASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX2Q9NPC8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.01□□□□□ -1.93
SIX2Q9NPC8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
SIX2Q9NPC8 AC138915.3-201ENST00000562908 1389 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 RNU6-1097P-201ENST00000363586 107 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 RNU6-1284P-201ENST00000363701 100 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 SNORA23-201ENST00000365128 182 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 Y_RNA.409-201ENST00000383990 98 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 RNU6-76P-201ENST00000384060 104 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 RNU6-1181P-201ENST00000384191 106 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 SNORA44-201ENST00000384584 132 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 RNU6-780P-201ENST00000391030 104 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 UBA52P6-201ENST00000399822 382 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 CIR1P3-201ENST00000405137 479 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 AL590002.1-201ENST00000406554 418 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 RNA5SP129-201ENST00000410276 118 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 MTATP6P18-201ENST00000417994 673 ntBASIC3.01□□□□□ -1.93
SIX2Q9NPC8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.01□□□□□ -1.93
SIX2Q9NPC8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.01□□□□□ -1.93
SIX2Q9NPC8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.01□□□□□ -1.93
SIX2Q9NPC8 RPL26P6-201ENST00000440913 438 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms