Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
UBQLN3Q9H347 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.83□□□□□ -1.96
UBQLN3Q9H347 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.83□□□□□ -1.96
UBQLN3Q9H347 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
UBQLN3Q9H347 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 UBE2L2-201ENST00000254302 429 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 MIR422A-201ENST00000362286 90 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 SNORD56.2-201ENST00000363242 71 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RNU6-288P-201ENST00000363690 104 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RNU4-1-201ENST00000363925 141 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RNU5E-6P-201ENST00000365574 115 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 SNORD15B-201ENST00000384714 146 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RPL23AP32-201ENST00000395315 459 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AL139397.2-201ENST00000404529 772 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RN7SKP220-201ENST00000410611 288 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RNU6-195P-201ENST00000411352 109 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC127391.1-201ENST00000411737 98 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 Z92545.1-201ENST00000411782 234 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AL714022.1-201ENST00000439897 151 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 PGBD4P3-201ENST00000440731 581 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AL022238.1-201ENST00000442557 355 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 CECR9-201ENST00000453421 199 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RPS27P26-201ENST00000494583 239 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC080014.1-201ENST00000496877 1201 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RNA5SP341-201ENST00000516261 117 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 RNU7-51P-201ENST00000516560 62 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC005771.1-201ENST00000585581 349 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC006504.3-201ENST00000586818 523 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC110760.3-201ENST00000598794 467 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC098826.3-201ENST00000603823 466 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC007363.1-201ENST00000604736 620 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC131902.3-201ENST00000611767 581 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC091304.9-201ENST00000612091 226 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AL133173.2-201ENST00000614270 90 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 AC002064.3-201ENST00000623448 346 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.82□□□□□ -1.96
UBQLN3Q9H347 MTND5P19-201ENST00000424872 1794 ntBASIC2.82□□□□□ -1.96
UBQLN3Q9H347 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 U8.3-201ENST00000363321 132 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 RNU4-91P-201ENST00000364778 135 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AL138885.1-201ENST00000405921 675 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 RNU6-193P-201ENST00000410977 107 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AC096664.2-201ENST00000411843 406 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 ZNF90P2-204ENST00000419323 1075 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 ISCA1P6-201ENST00000427740 390 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AC104332.2-201ENST00000429959 156 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AC117532.1-201ENST00000514638 323 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 RNU6-1092P-201ENST00000516955 87 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 RNU6-56P-201ENST00000516986 93 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 HMGB1P41-201ENST00000520234 440 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AP002404.1-201ENST00000532005 451 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 MIR3682-201ENST00000581338 84 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AL161798.1-201ENST00000604630 131 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AL035413.2-201ENST00000604801 525 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AL160281.1-201ENST00000605307 311 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 AC004805.2-201ENST00000605382 482 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 FTX_3.1-201ENST00000610451 147 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.81□□□□□ -1.96
UBQLN3Q9H347 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.81□□□□□ -1.96
UBQLN3Q9H347 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms