Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC104662.1-201ENST00000604448 511 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 Z82243.1-201ENST00000609432 473 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 uc_338.13-201ENST00000618243 179 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 PLCE1P1-201ENST00000622094 305 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 AC243312.2-201ENST00000623340 601 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 AC008013.2-202ENST00000637965 364 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS11Q9H270 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC010733.2-201ENST00000589496 5702 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC009812.4-201ENST00000569134 1805 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS11Q9H270 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS11Q9H270 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
VPS11Q9H270 RNU6-266P-201ENST00000364225 107 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 SNORA62.1-201ENST00000364287 154 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 RNU6-472P-201ENST00000384299 107 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 SNORA11F-201ENST00000408237 128 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 RNU4-65P-201ENST00000410473 140 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 AC011998.1-201ENST00000433403 117 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 RPL7P28-201ENST00000437739 740 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 RPL23AP52-201ENST00000439311 478 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 HSFY6P-201ENST00000445573 403 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 RPL23AP31-201ENST00000456160 467 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 AC015911.1-201ENST00000495111 156 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS11Q9H270 VN1R104P-201ENST00000505115 1009 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 RNU6-408P-201ENST00000515910 100 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 Y_RNA.661-201ENST00000516003 99 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS11Q9H270 AC090136.1-201ENST00000520009 240 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS11Q9H270 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS11Q9H270 MIR4480-201ENST00000582492 71 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 AC113403.1-201ENST00000604910 193 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 AL034351.1-201ENST00000605288 668 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 AL159972.1-201ENST00000625150 448 ntBASIC4.2□□□□□ -1.74
VPS11Q9H270 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS11Q9H270 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS11Q9H270 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS11Q9H270 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS11Q9H270 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS11Q9H270 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS11Q9H270 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS11Q9H270 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS11Q9H270 AC121333.1-201ENST00000567488 2709 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS11Q9H270 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS11Q9H270 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS11Q9H270 RNA5SP322-201ENST00000363617 119 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 Y_RNA.212-201ENST00000364177 102 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 SNORA75B-201ENST00000384053 137 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 RNU6-432P-201ENST00000384196 109 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 RNU1-89P-201ENST00000384592 164 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 Y_RNA.552-201ENST00000384665 112 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 MIR585-201ENST00000384887 94 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 RNA5SP332-201ENST00000391063 115 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 MTCO2P33-201ENST00000402100 465 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS11Q9H270 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS11Q9H270 MTATP6P4-201ENST00000427725 675 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS11Q9H270 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS11Q9H270 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS11Q9H270 PHBP16-201ENST00000446318 950 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 RPL23AP81-201ENST00000455252 467 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 RNU7-59P-201ENST00000459101 61 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 RPL21P104-201ENST00000464143 478 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS11Q9H270 AC069499.1-201ENST00000489433 509 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 RPS23P1-201ENST00000491662 432 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AC068305.1-201ENST00000497406 726 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 Y_RNA.654-201ENST00000497848 106 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AC135721.1-201ENST00000497954 479 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS11Q9H270 SNORA31.8-201ENST00000516327 108 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 DEFB108D-201ENST00000527787 222 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AC023157.2-201ENST00000540596 141 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS11Q9H270 RPL23AP87-202ENST00000573039 466 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AC023043.2-201ENST00000589678 1026 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS11Q9H270 AC020914.4-201ENST00000597690 277 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AL161616.1-201ENST00000611867 286 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AC133104.2-201ENST00000615272 193 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AC092608.2-201ENST00000624427 218 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 AC140479.6-201ENST00000633535 357 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 EXOC5P1-201ENST00000510543 1969 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 BDP1P-201ENST00000582658 1990 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS11Q9H270 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS11Q9H270 OR56B2P-202ENST00000641377 2453 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 DDX10P1-201ENST00000448545 1933 ntBASIC4.19□□□□□ -1.74
VPS11Q9H270 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms