Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC007785.2-201ENST00000598627 1916 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TRIM4Q9C037 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TRIM4Q9C037 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM4Q9C037 MIR613-201ENST00000385248 95 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 AL627390.1-201ENST00000396055 340 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.81□□□□□ -2.12
TRIM4Q9C037 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.81□□□□□ -2.12
TRIM4Q9C037 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.81□□□□□ -2.12
TRIM4Q9C037 AL500527.1-201ENST00000448532 255 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM4Q9C037 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.81□□□□□ -2.12
TRIM4Q9C037 AC138853.1-201ENST00000503549 823 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.81□□□□□ -2.12
TRIM4Q9C037 RNU6-1256P-201ENST00000516539 103 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 AC103833.1-201ENST00000517442 172 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 NIFKP8-201ENST00000560500 874 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.81□□□□□ -2.12
TRIM4Q9C037 AC233266.2-201ENST00000567067 528 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 MIR5571-201ENST00000577998 113 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 AL022067.1-201ENST00000602426 454 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 AC012360.2-201ENST00000609349 391 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 AC244517.12-201ENST00000623581 663 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 AC091953.2-201ENST00000623979 160 ntBASIC1.81□□□□□ -2.12
TRIM4Q9C037 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRIM4Q9C037 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-1-201ENST00000383898 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-42P-201ENST00000384165 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-36P-201ENST00000384172 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-4P-201ENST00000384205 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-5P-201ENST00000384238 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-3P-201ENST00000384314 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-878P-201ENST00000384578 110 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-2-201ENST00000384627 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-9-201ENST00000384776 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-33P-201ENST00000384793 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 RPL7P27-201ENST00000403775 720 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 AL021407.1-201ENST00000404531 386 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 CYCSP48-201ENST00000417124 323 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 AL590623.1-201ENST00000427864 105 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 UBE2V2P3-201ENST00000433562 437 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 AL050341.1-201ENST00000447743 313 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 AL049874.1-201ENST00000489560 388 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC104685.1-201ENST00000502445 371 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 COX7A2P2-201ENST00000505291 250 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC093281.2-201ENST00000510153 597 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC091965.2-201ENST00000512324 613 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC022483.1-201ENST00000514020 567 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNA5SP182-201ENST00000516064 82 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM4Q9C037 KATNBL1P1-201ENST00000605192 748 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RNU6-6P-201ENST00000606623 107 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 RMST_10.1-201ENST00000616309 154 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 MIR6779-201ENST00000617283 64 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 AC010329.5-201ENST00000623497 2174 ntBASIC1.8□□□□□ -2.12
TRIM4Q9C037 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM4Q9C037 Y_RNA.112-201ENST00000363250 102 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.79□□□□□ -2.12
TRIM4Q9C037 SNORD116-23-201ENST00000384645 92 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AL512604.1-201ENST00000404812 257 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 MIR1276-201ENST00000408707 83 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 RNU2-20P-201ENST00000410425 191 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 MTND4LP14-201ENST00000429447 288 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM4Q9C037 BNIP3P2-201ENST00000441221 577 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 MRPS17P3-201ENST00000465453 385 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC048346.1-201ENST00000510247 144 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM4Q9C037 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM4Q9C037 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC008127.2-201ENST00000549925 1075 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC124947.2-202ENST00000552735 133 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 PSMA3P-201ENST00000555485 635 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM4Q9C037 AP005136.1-201ENST00000579765 429 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC005034.5-201ENST00000604219 466 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AL445493.3-201ENST00000619568 477 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC073592.7-201ENST00000623659 507 ntBASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.79□□□□□ -2.12
TRIM4Q9C037 AC008555.8-201ENST00000623602 2168 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.78□□□□□ -2.12
TRIM4Q9C037 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC233981.2-201ENST00000611524 1614 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 U8.3-201ENST00000363321 132 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 MIR514A1-201ENST00000385133 98 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 RNU2-49P-201ENST00000410666 184 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms