Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 Z98941.1-201ENST00000407764 100 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 RNU2-9P-201ENST00000410194 145 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 Z85995.1-201ENST00000415547 335 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 Z82210.1-201ENST00000440037 231 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 MTND4P25-201ENST00000441039 533 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 FABP5P13-201ENST00000452144 328 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC083798.1-201ENST00000472671 131 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 RNA5SP341-201ENST00000516261 117 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 RN7SKP83-201ENST00000516512 178 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 RNU6-1282P-201ENST00000516735 96 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 RNU6-143P-201ENST00000516942 93 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC025678.1-201ENST00000567861 338 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 MTATP6P3-201ENST00000581686 676 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC107304.1-201ENST00000604229 296 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC007619.2-201ENST00000605743 379 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AF250324.2-201ENST00000608299 610 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC002076.2-201ENST00000617362 122 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 API5P2-201ENST00000397055 1498 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC010733.2-201ENST00000589496 5702 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 ELF2P3-201ENST00000445099 1506 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AL136164.4-201ENST00000625013 2135 ntBASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.15□□□□□ -1.75
RTFDC1Q9BY42 AC073073.2-201ENST00000609827 2578 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 RNU6-283P-201ENST00000364788 107 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 Y_RNA.402-201ENST00000383972 102 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 SDCBPP3-201ENST00000419629 891 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 BNIP3P2-201ENST00000441221 577 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 DPPA3P1-201ENST00000448050 469 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 RPL36AP51-201ENST00000487216 318 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 RPL39P36-201ENST00000490784 156 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC006445.1-201ENST00000491925 405 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 ARL4AP2-201ENST00000507378 601 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 OR5AQ1P-201ENST00000527596 927 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC109635.3-201ENST00000529536 185 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC104383.1-201ENST00000530297 370 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 OR5AL2P-201ENST00000532185 920 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AL451007.1-201ENST00000595491 289 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC025165.5-201ENST00000602802 578 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC073657.2-201ENST00000605661 303 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC009570.1-201ENST00000609599 745 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 MIR486-1-201ENST00000612171 68 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 MIR6076-201ENST00000617521 113 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 AC093648.1-201ENST00000623546 606 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 TNPO1P3-201ENST00000436471 2662 ntBASIC4.14□□□□□ -1.75
RTFDC1Q9BY42 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 RNU6-1167P-201ENST00000363227 94 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 SNORA62.1-201ENST00000364287 154 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 RNU4-12P-201ENST00000365233 139 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 SNORA24.1-201ENST00000384401 135 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 RHEBP3-201ENST00000411920 351 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AL591212.2-201ENST00000433923 257 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 MTND1P18-201ENST00000448191 573 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC109925.1-201ENST00000478069 331 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC097462.2-201ENST00000504623 481 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 MTND4LP26-201ENST00000518144 282 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC005476.1-201ENST00000554427 397 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 HMGB1P14-201ENST00000557424 591 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC092954.2-201ENST00000609103 430 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AC012409.4-201ENST00000612923 249 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 AL162274.2-201ENST00000614406 332 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 MTND1P37-201ENST00000636562 264 ntBASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTFDC1Q9BY42 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms