Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ELOCP31-201ENST00000540463 467 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC006064.5-201ENST00000541782 248 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC015912.2-201ENST00000571053 181 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 MIR4775-201ENST00000581168 75 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 MIR4672-201ENST00000583126 81 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 MIR5684-201ENST00000585074 65 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC002545.1-201ENST00000592511 181 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC244505.7-201ENST00000599675 272 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 MIR8069-1-201ENST00000616627 86 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 MIR8069-2-201ENST00000621412 86 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC048347.1-201ENST00000624621 427 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC087190.4-201ENST00000574616 8334 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 SNORA80A-201ENST00000363922 136 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 SNORA62.1-201ENST00000364287 154 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 Y_RNA.259-201ENST00000364619 101 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 SNORA4.3-201ENST00000365564 137 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 SNORD42.2-201ENST00000365570 69 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 SMIM11P1-201ENST00000369586 178 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 Y_RNA.422-201ENST00000384054 114 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC087650.1-201ENST00000431445 468 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC073063.1-201ENST00000434352 607 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 RPL32P28-201ENST00000443577 397 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC087588.1-201ENST00000462203 316 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 HMGN2P26-201ENST00000463169 339 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC130509.1-201ENST00000464158 433 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 RPS4XP13-201ENST00000483219 789 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC108078.2-201ENST00000510750 236 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 CYCSP40-201ENST00000575927 294 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 MIR4325-201ENST00000583049 90 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC091178.1-203ENST00000584586 279 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AL160290.3-201ENST00000604869 165 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC091167.4-201ENST00000605079 184 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AL359547.2-201ENST00000615810 418 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 AL133383.2-201ENST00000622958 2336 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 API5P2-201ENST00000397055 1498 ntBASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRFN3Q9BTN0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AL353743.1-202ENST00000431724 1695 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 U1.1-201ENST00000384101 164 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 RNU6-43P-201ENST00000384302 107 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 SNORA24.1-201ENST00000384401 135 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 RNU2-37P-201ENST00000410695 177 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AL161631.1-201ENST00000417933 486 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AL645937.1-202ENST00000421799 937 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 GTF2IP13-201ENST00000438487 386 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 Y_RNA.639-201ENST00000458981 102 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 TRBV1-201ENST00000476502 284 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 RNU6-1170P-201ENST00000515974 106 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 SNORA31.3-201ENST00000516029 96 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 SNORA70.16-201ENST00000516390 95 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 RN7SKP60-201ENST00000516985 239 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 RNA5SP291-201ENST00000517222 105 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 RANP3-201ENST00000530970 276 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 AC005951.2-201ENST00000576282 495 ntBASIC4.01□□□□□ -1.77
LRFN3Q9BTN0 MIR5187-201ENST00000583479 76 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms