Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC090525.1-201ENST00000479116 478 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 RPL36AP51-201ENST00000487216 318 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC135721.1-201ENST00000497954 479 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC091951.3-201ENST00000504093 246 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC008716.1-201ENST00000511084 513 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC010587.2-201ENST00000511727 448 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.19□□□□□ -2.06
FOXC2Q99958 RN7SKP24-201ENST00000515888 284 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 RNA5SP320-201ENST00000516263 124 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 SNORA31.18-201ENST00000517043 134 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.19□□□□□ -2.06
FOXC2Q99958 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXC2Q99958 ELOCP31-201ENST00000540463 467 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 DUXAP1-201ENST00000556632 463 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXC2Q99958 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AC061975.8-201ENST00000587058 721 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC002545.1-201ENST00000592511 181 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC112220.3-201ENST00000605502 502 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AL020991.1-201ENST00000612314 373 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AC068787.1-201ENST00000623908 691 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AC099063.3-201ENST00000642066 185 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC092447.7-201ENST00000422212 1621 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
FOXC2Q99958 AL137003.2-201ENST00000606924 2538 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.19□□□□□ -2.06
FOXC2Q99958 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXC2Q99958 VTRNA1-1-201ENST00000363120 99 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 RNU6-884P-201ENST00000363889 107 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 RNA5SP99-201ENST00000364020 114 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 RNU6-253P-201ENST00000384730 105 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXC2Q99958 CCNG1P1-201ENST00000406783 885 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AC007064.1-201ENST00000412238 351 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 RPS25P9-201ENST00000435591 252 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXC2Q99958 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.18□□□□□ -2.06
FOXC2Q99958 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.18□□□□□ -2.06
FOXC2Q99958 RPL12P25-201ENST00000455592 494 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 MTND1P16-201ENST00000465177 898 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AC103975.1-201ENST00000482506 483 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 HMGB1P36-201ENST00000487709 576 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AL160314.1-201ENST00000490836 438 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.18□□□□□ -2.06
FOXC2Q99958 RNU6-826P-201ENST00000516827 104 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 SCARNA11.3-201ENST00000517276 130 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AC105185.1-201ENST00000518705 535 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.18□□□□□ -2.06
FOXC2Q99958 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.18□□□□□ -2.06
FOXC2Q99958 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.18□□□□□ -2.06
FOXC2Q99958 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC009712.1-201ENST00000564938 316 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.18□□□□□ -2.06
FOXC2Q99958 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC025588.2-201ENST00000604851 466 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 MTND4LP5-201ENST00000605152 292 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AC090186.1-201ENST00000605991 572 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AC245297.2-201ENST00000610119 565 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 SDR42E1P2-201ENST00000614861 481 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AL353997.5-201ENST00000618886 171 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXC2Q99958 AC002543.1-201ENST00000299783 1954 ntBASIC2.18□□□□□ -2.06
FOXC2Q99958 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXC2Q99958 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
FOXC2Q99958 AC080128.1-201ENST00000474389 1917 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXC2Q99958 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXC2Q99958 RNU6-432P-201ENST00000384196 109 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXC2Q99958 RNU6-757P-201ENST00000410334 100 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 AL008987.1-201ENST00000415528 237 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 MTCO2P21-201ENST00000419780 677 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXC2Q99958 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 MTND3P1-201ENST00000441336 220 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXC2Q99958 RPL7P12-201ENST00000446719 750 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXC2Q99958 AC233279.1-201ENST00000455300 423 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXC2Q99958 MEMO1P3-201ENST00000459811 302 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 AC133134.1-201ENST00000466800 359 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 RN7SL636P-201ENST00000497504 294 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 EIF4EP3-201ENST00000498782 656 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms