Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.64□□□□□ -2.31
COL12A1Q99715 EIF4A1P12-201ENST00000551910 141 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 MIR329-1-201ENST00000385028 80 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AL356379.1-201ENST00000414105 126 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.63□□□□□ -2.31
COL12A1Q99715 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.63□□□□□ -2.31
COL12A1Q99715 AL161651.1-201ENST00000440882 223 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 CASP3P1-201ENST00000446037 609 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.63□□□□□ -2.31
COL12A1Q99715 IGLVI-20-201ENST00000519296 130 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.63□□□□□ -2.31
COL12A1Q99715 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AL589935.2-201ENST00000616471 1231 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AC009090.3-201ENST00000616553 565 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 SNORA46.1-201ENST00000391069 153 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AC068050.1-201ENST00000394891 380 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.63□□□□□ -2.31
COL12A1Q99715 RPS6P14-201ENST00000425165 719 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
COL12A1Q99715 CDC42P4-201ENST00000510507 563 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 SNORD84-203ENST00000584275 78 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AC073592.7-201ENST00000623659 507 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
COL12A1Q99715 MIR153-2-201ENST00000385225 87 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 MED14P1-201ENST00000430517 648 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.63□□□□□ -2.31
COL12A1Q99715 HSPE1P22-201ENST00000456856 327 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AC026801.1-201ENST00000497178 464 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 AC135178.6-201ENST00000605314 398 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 RNA5SP108-201ENST00000605921 117 ntBASIC0.63□□□□□ -2.31
COL12A1Q99715 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 Y_RNA.35-201ENST00000362601 101 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 HMGN2P30-201ENST00000423237 256 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 AC079780.1-201ENST00000428259 207 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 ELOCP10-201ENST00000440624 327 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 HMGN2P10-201ENST00000448085 265 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 AC091965.2-201ENST00000512324 613 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.62□□□□□ -2.31
COL12A1Q99715 ELOCP34-201ENST00000604436 327 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
COL12A1Q99715 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
COL12A1Q99715 ZNF519P1-201ENST00000449011 1626 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 RNA5SP25-201ENST00000410815 110 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 MTCO1P53-201ENST00000441633 699 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 SNRPGP12-201ENST00000449481 213 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 MTND4LP3-201ENST00000468320 276 ntBASIC0.62□□□□□ -2.31
COL12A1Q99715 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.62□□□□□ -2.31
COL12A1Q99715 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
COL12A1Q99715 AC073464.3-201ENST00000422564 712 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 AL353706.1-201ENST00000436728 494 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 AL161788.1-201ENST00000441805 169 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.61□□□□□ -2.31
COL12A1Q99715 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
COL12A1Q99715 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.61□□□□□ -2.31
COL12A1Q99715 AC008749.1-201ENST00000597650 306 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 RNU6-39P-201ENST00000384344 107 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 AC092648.1-201ENST00000425870 423 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 LDHBP3-201ENST00000514909 822 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 RNA5SP471-201ENST00000516971 106 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.61□□□□□ -2.31
COL12A1Q99715 VN1R84P-201ENST00000593697 235 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 AC008555.8-201ENST00000623602 2168 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 AC007785.2-201ENST00000598627 1916 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 CD24P4-201ENST00000382840 243 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 SNORA51.10-201ENST00000384418 136 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.61□□□□□ -2.31
COL12A1Q99715 AL050343.2-201ENST00000607338 280 ntBASIC0.61□□□□□ -2.31
COL12A1Q99715 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.61□□□□□ -2.31
COL12A1Q99715 Y_RNA.25-201ENST00000362528 102 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 MTND4LP13-201ENST00000425022 298 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 AC025768.1-201ENST00000510057 267 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
COL12A1Q99715 MIR4658-201ENST00000584344 65 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
COL12A1Q99715 RNU6-1164P-201ENST00000364428 107 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 Y_RNA.559-201ENST00000384686 107 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 AC097493.1-201ENST00000463958 372 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 RPL21P104-201ENST00000464143 478 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 HMGB3P17-201ENST00000504195 649 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 AL390240.1-201ENST00000612950 384 ntBASIC0.6□□□□□ -2.31
COL12A1Q99715 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
COL12A1Q99715 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.59□□□□□ -2.31
COL12A1Q99715 AL589743.1-201ENST00000551932 2712 ntBASIC0.59□□□□□ -2.31
COL12A1Q99715 RNA5SP299-201ENST00000391203 116 ntBASIC0.59□□□□□ -2.31
COL12A1Q99715 SNORD56-201ENST00000413522 71 ntBASIC0.59□□□□□ -2.31
COL12A1Q99715 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.59□□□□□ -2.31
COL12A1Q99715 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.59□□□□□ -2.31
COL12A1Q99715 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.59□□□□□ -2.31
COL12A1Q99715 OR5BM1P-201ENST00000512021 366 ntBASIC0.59□□□□□ -2.31
COL12A1Q99715 AP003327.1-201ENST00000529684 127 ntBASIC0.59□□□□□ -2.31
COL12A1Q99715 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.59□□□□□ -2.31
COL12A1Q99715 AC008269.2-201ENST00000561915 1105 ntBASIC0.59□□□□□ -2.31
COL12A1Q99715 MTND4LP24-201ENST00000572277 291 ntBASIC0.59□□□□□ -2.31
COL12A1Q99715 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.59□□□□□ -2.31
COL12A1Q99715 RNU6-50P-201ENST00000362356 103 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 RNU6-112P-201ENST00000363599 104 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms