Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC008568.2-201ENST00000623862 2313 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDCA3Q99618 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.97□□□□□ -1.93
CDCA3Q99618 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDCA3Q99618 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.97□□□□□ -1.93
CDCA3Q99618 TEX21P-201ENST00000447107 1476 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.97□□□□□ -1.93
CDCA3Q99618 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.97□□□□□ -1.93
CDCA3Q99618 Y_RNA.51-201ENST00000362725 102 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 RNY4P34-201ENST00000364779 95 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AP002088.1-201ENST00000382740 395 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 RNU6-297P-201ENST00000384636 107 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 RNU2-62P-201ENST00000410868 191 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 RN7SKP140-201ENST00000411196 284 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.97□□□□□ -1.93
CDCA3Q99618 MYL8P-204ENST00000431574 518 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.97□□□□□ -1.93
CDCA3Q99618 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.97□□□□□ -1.93
CDCA3Q99618 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.97□□□□□ -1.93
CDCA3Q99618 MTND6P13-201ENST00000443510 523 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.97□□□□□ -1.93
CDCA3Q99618 RPS20P20-201ENST00000460498 340 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 LARP1BP2-201ENST00000486594 519 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 RN7SL283P-201ENST00000489055 303 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.97□□□□□ -1.93
CDCA3Q99618 AC010587.1-201ENST00000505809 469 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.97□□□□□ -1.93
CDCA3Q99618 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.97□□□□□ -1.93
CDCA3Q99618 CDC42P4-201ENST00000510507 563 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 Y_RNA.672-201ENST00000516289 104 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 RN7SKP282-201ENST00000516824 299 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 RNU2-46P-201ENST00000517038 113 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CDCA3Q99618 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.97□□□□□ -1.93
CDCA3Q99618 RPL23AP84-201ENST00000571193 464 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 MIR4293-201ENST00000584305 78 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AC040904.1-201ENST00000590850 223 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 RSL24D1P11-201ENST00000591045 491 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.97□□□□□ -1.93
CDCA3Q99618 AP000860.1-201ENST00000605250 559 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 SDR42E1P2-201ENST00000614861 481 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 uc_338.12-201ENST00000616344 181 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AL136164.4-201ENST00000625013 2135 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 AP003399.1-201ENST00000637534 361 ntBASIC2.97□□□□□ -1.93
CDCA3Q99618 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDCA3Q99618 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDCA3Q99618 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDCA3Q99618 RNA5SP68-201ENST00000363885 119 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 U3.11-201ENST00000364476 212 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 MIR1290-201ENST00000408735 78 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 RN7SKP123-201ENST00000410732 291 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.96□□□□□ -1.94
CDCA3Q99618 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.96□□□□□ -1.94
CDCA3Q99618 AC016907.1-201ENST00000419483 435 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 MTCO2P34-201ENST00000421994 607 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 USP12PX-201ENST00000432383 1057 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AC092573.2-201ENST00000434546 243 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 HIGD1AP11-201ENST00000438361 280 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.96□□□□□ -1.94
CDCA3Q99618 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.96□□□□□ -1.94
CDCA3Q99618 SSXP4-201ENST00000451349 245 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AL359385.1-201ENST00000456509 365 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 RNA5SP310-201ENST00000459084 116 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 MTND4P2-201ENST00000507767 1203 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 RNU1-143P-201ENST00000516296 146 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 RNU6-1256P-201ENST00000516539 103 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AC022690.1-201ENST00000526681 550 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.96□□□□□ -1.94
CDCA3Q99618 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.96□□□□□ -1.94
CDCA3Q99618 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.96□□□□□ -1.94
CDCA3Q99618 AC234778.2-201ENST00000566241 354 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.96□□□□□ -1.94
CDCA3Q99618 AC078899.3-201ENST00000599065 212 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 U1.23-201ENST00000610293 146 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AC131902.3-201ENST00000611767 581 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AC010678.1-201ENST00000614118 713 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AC013476.2-201ENST00000614456 459 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 RNU1-68P-201ENST00000615382 146 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 AC090132.2-201ENST00000615881 347 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 SNHG22-203ENST00000617833 660 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 U1.39-201ENST00000621562 146 ntBASIC2.96□□□□□ -1.94
CDCA3Q99618 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDCA3Q99618 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.96□□□□□ -1.94
CDCA3Q99618 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDCA3Q99618 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.95□□□□□ -1.94
CDCA3Q99618 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
CDCA3Q99618 SDAD1P2-201ENST00000441308 2028 ntBASIC2.95□□□□□ -1.94
CDCA3Q99618 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDCA3Q99618 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDCA3Q99618 U8.3-201ENST00000363321 132 ntBASIC2.95□□□□□ -1.94
CDCA3Q99618 BTF3L4P1-201ENST00000413813 468 ntBASIC2.95□□□□□ -1.94
CDCA3Q99618 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.95□□□□□ -1.94
CDCA3Q99618 AC006366.1-201ENST00000422002 759 ntBASIC2.95□□□□□ -1.94
CDCA3Q99618 AL356867.1-201ENST00000429623 299 ntBASIC2.95□□□□□ -1.94
CDCA3Q99618 AC119618.1-201ENST00000434191 222 ntBASIC2.95□□□□□ -1.94
CDCA3Q99618 BX679664.1-201ENST00000434429 253 ntBASIC2.95□□□□□ -1.94
CDCA3Q99618 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.95□□□□□ -1.94
CDCA3Q99618 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms