Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.62□□□□□ -2.31
SPENQ96T58 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 AP001486.3-201ENST00000615334 372 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 CCT4P2-201ENST00000233836 1548 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SPENQ96T58 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SPENQ96T58 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SPENQ96T58 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.61□□□□□ -2.31
SPENQ96T58 AC096745.1-201ENST00000509945 370 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 SNORA48.11-201ENST00000517015 89 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.61□□□□□ -2.31
SPENQ96T58 SNORD84-203ENST00000584275 78 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.61□□□□□ -2.31
SPENQ96T58 AC010620.1-201ENST00000601088 1102 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.61□□□□□ -2.31
SPENQ96T58 AL591034.1-201ENST00000407447 340 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 MTATP6P4-201ENST00000427725 675 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.61□□□□□ -2.31
SPENQ96T58 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.61□□□□□ -2.31
SPENQ96T58 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SPENQ96T58 OR4G2P-201ENST00000328113 903 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 CLIC4P1-201ENST00000453177 535 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.61□□□□□ -2.31
SPENQ96T58 AC105252.1-201ENST00000503089 286 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 SNORA31.25-201ENST00000517242 134 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 EIF4A1P12-201ENST00000551910 141 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 AL118508.4-201ENST00000624142 1176 ntBASIC0.61□□□□□ -2.31
SPENQ96T58 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SPENQ96T58 AC068050.1-201ENST00000394891 380 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.6□□□□□ -2.31
SPENQ96T58 AL121769.1-201ENST00000469473 401 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AL163153.1-201ENST00000554223 283 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.6□□□□□ -2.31
SPENQ96T58 AC113368.1-201ENST00000603736 382 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AC021646.1-201ENST00000605469 484 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.6□□□□□ -2.31
SPENQ96T58 AC006065.5-201ENST00000623427 349 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AP003485.1-201ENST00000625093 753 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 SNORA46.1-201ENST00000391069 153 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AL161734.1-201ENST00000609720 557 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
SPENQ96T58 CBX3P1-201ENST00000325243 554 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 RNU6-955P-201ENST00000410497 104 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 RNU2-71P-201ENST00000411395 189 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AC010735.1-201ENST00000567305 1026 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 CYP2C61P-201ENST00000604072 290 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AC087045.1-201ENST00000605856 382 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AC004908.2-201ENST00000609090 574 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 AC022079.2-201ENST00000619739 566 ntBASIC0.6□□□□□ -2.31
SPENQ96T58 ZNF519P1-201ENST00000449011 1626 ntBASIC0.59□□□□□ -2.31
SPENQ96T58 RNU6-1164P-201ENST00000364428 107 ntBASIC0.59□□□□□ -2.31
SPENQ96T58 CIR1P3-201ENST00000405137 479 ntBASIC0.59□□□□□ -2.31
SPENQ96T58 FAM106CP-201ENST00000582212 507 ntBASIC0.59□□□□□ -2.31
SPENQ96T58 AC090953.1-201ENST00000604305 1092 ntBASIC0.59□□□□□ -2.31
SPENQ96T58 uc_338.9-201ENST00000617424 182 ntBASIC0.59□□□□□ -2.31
SPENQ96T58 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.59□□□□□ -2.31
SPENQ96T58 RNU1-72P-201ENST00000362976 153 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 RNU6-1263P-201ENST00000384601 106 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.59□□□□□ -2.32
SPENQ96T58 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.59□□□□□ -2.32
SPENQ96T58 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SPENQ96T58 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.59□□□□□ -2.32
SPENQ96T58 HSBP1P1-201ENST00000555205 166 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 MIR3117-201ENST00000584034 78 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 AC006001.4-201ENST00000622243 395 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 AC079597.1-201ENST00000624306 508 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 Y_RNA.170-201ENST00000363746 110 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 SNORD114-15-201ENST00000364687 72 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 AC060773.1-201ENST00000421698 310 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.59□□□□□ -2.32
SPENQ96T58 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.59□□□□□ -2.32
SPENQ96T58 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.59□□□□□ -2.32
SPENQ96T58 PABPC1P3-201ENST00000469174 459 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.59□□□□□ -2.32
SPENQ96T58 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.59□□□□□ -2.32
SPENQ96T58 CYP4A27P-201ENST00000567218 190 ntBASIC0.59□□□□□ -2.32
SPENQ96T58 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SPENQ96T58 RNU6-50P-201ENST00000362356 103 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 RNU6-43P-201ENST00000384302 107 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 RNA5SP266-201ENST00000410273 108 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.58□□□□□ -2.32
SPENQ96T58 AC118469.1-201ENST00000442943 488 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SPENQ96T58 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.58□□□□□ -2.32
SPENQ96T58 ZNF702P-202ENST00000434269 1966 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 RPL30P5-201ENST00000494923 336 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 SUB1P1-201ENST00000524415 382 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.58□□□□□ -2.32
SPENQ96T58 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.58□□□□□ -2.32
SPENQ96T58 AC109809.1-201ENST00000619665 545 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 HMGN2P30-201ENST00000423237 256 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.58□□□□□ -2.32
SPENQ96T58 AC005332.10-201ENST00000612725 619 ntBASIC0.58□□□□□ -2.32
SPENQ96T58 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms