Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC243829.3-201ENST00000622177 108 ntBASIC0.55□□□□□ -2.32
VPS13AQ96RL7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS13AQ96RL7 MTCO1P23-201ENST00000415223 1526 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 RNA5SP63-201ENST00000391225 112 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 MTCO1P3-201ENST00000429327 192 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 RPL39P29-201ENST00000447779 157 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.54□□□□□ -2.32
VPS13AQ96RL7 RNU4-77P-201ENST00000516692 156 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 AL157700.1-201ENST00000561973 1432 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 AC060773.1-201ENST00000421698 310 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 RPL30P5-201ENST00000494923 336 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
VPS13AQ96RL7 AC006001.4-201ENST00000622243 395 ntBASIC0.54□□□□□ -2.32
VPS13AQ96RL7 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.53□□□□□ -2.32
VPS13AQ96RL7 AL356867.1-201ENST00000429623 299 ntBASIC0.53□□□□□ -2.32
VPS13AQ96RL7 AC006213.5-201ENST00000619673 288 ntBASIC0.53□□□□□ -2.32
VPS13AQ96RL7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
VPS13AQ96RL7 HAUS6P2-201ENST00000433254 2404 ntBASIC0.53□□□□□ -2.32
VPS13AQ96RL7 AC009812.4-201ENST00000569134 1805 ntBASIC0.53□□□□□ -2.32
VPS13AQ96RL7 SNRPGP12-201ENST00000449481 213 ntBASIC0.53□□□□□ -2.32
VPS13AQ96RL7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.53□□□□□ -2.32
VPS13AQ96RL7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
VPS13AQ96RL7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS13AQ96RL7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS13AQ96RL7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
VPS13AQ96RL7 RNU6-1181P-201ENST00000384191 106 ntBASIC0.53□□□□□ -2.33
VPS13AQ96RL7 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.33
VPS13AQ96RL7 AC005410.1-202ENST00000460347 485 ntBASIC0.53□□□□□ -2.33
VPS13AQ96RL7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.53□□□□□ -2.33
VPS13AQ96RL7 RNU6-928P-201ENST00000516876 104 ntBASIC0.53□□□□□ -2.33
VPS13AQ96RL7 AL160236.1-201ENST00000556317 195 ntBASIC0.53□□□□□ -2.33
VPS13AQ96RL7 AC106052.1-201ENST00000608029 497 ntBASIC0.53□□□□□ -2.33
VPS13AQ96RL7 AC240442.1-201ENST00000616055 283 ntBASIC0.53□□□□□ -2.33
VPS13AQ96RL7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.53□□□□□ -2.33
VPS13AQ96RL7 OR5H6-203ENST00000642105 978 ntBASIC0.53□□□□□ -2.33
VPS13AQ96RL7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
VPS13AQ96RL7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.52□□□□□ -2.33
VPS13AQ96RL7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.52□□□□□ -2.33
VPS13AQ96RL7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS13AQ96RL7 MTND5P15-201ENST00000434246 349 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AC020699.1-201ENST00000505161 445 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AL355802.3-201ENST00000607571 545 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.52□□□□□ -2.33
VPS13AQ96RL7 MIR4278-201ENST00000636094 69 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AC080100.1-201ENST00000624239 5356 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 RNU6-1305P-201ENST00000364353 104 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AC073464.3-201ENST00000422564 712 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AC073614.1-201ENST00000438690 650 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AC068446.3-201ENST00000555285 382 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 MIR4474-201ENST00000579189 78 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 AC009974.1-201ENST00000608881 455 ntBASIC0.52□□□□□ -2.33
VPS13AQ96RL7 SNORD95.1-201ENST00000364099 68 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 RNU6-48P-201ENST00000384161 107 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 AC093716.1-201ENST00000435923 377 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 AC092628.1-201ENST00000436250 252 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13AQ96RL7 AC245884.12-201ENST00000615364 59 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 AL356473.1-201ENST00000406203 1408 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 MIR1468-201ENST00000410600 86 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 UBBP3-201ENST00000445497 241 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.51□□□□□ -2.33
VPS13AQ96RL7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13AQ96RL7 LINC00557-201ENST00000563184 1279 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.51□□□□□ -2.33
VPS13AQ96RL7 AP001486.3-201ENST00000615334 372 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
VPS13AQ96RL7 SNORA16B-201ENST00000364674 135 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 MTND4LP3-201ENST00000468320 276 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 HSBP1P1-201ENST00000555205 166 ntBASIC0.51□□□□□ -2.33
VPS13AQ96RL7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
VPS13AQ96RL7 Y_RNA.18-201ENST00000362461 102 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 MIR146A-201ENST00000385201 99 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 MRPL35P3-201ENST00000421557 364 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 AL606489.2-201ENST00000433886 234 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.5□□□□□ -2.33
VPS13AQ96RL7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.5□□□□□ -2.33
VPS13AQ96RL7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.5□□□□□ -2.33
VPS13AQ96RL7 DBF4P1-201ENST00000412976 1892 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 AL022578.1-201ENST00000439330 1433 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 PMCHL2-203ENST00000457791 237 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13AQ96RL7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13AQ96RL7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13AQ96RL7 AP003355.1-201ENST00000518956 587 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 CYP4A27P-201ENST00000567218 190 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 ELOCP5-201ENST00000604924 333 ntBASIC0.5□□□□□ -2.33
VPS13AQ96RL7 RNU4-67P-201ENST00000364569 141 ntBASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AL158823.1-201ENST00000418441 478 ntBASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AC009296.1-201ENST00000443146 155 ntBASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AL355297.2-201ENST00000604792 129 ntBASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AC024060.1-201ENST00000607052 494 ntBASIC0.49□□□□□ -2.33
VPS13AQ96RL7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AL031183.1-201ENST00000457667 207 ntBASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13AQ96RL7 AC004908.2-201ENST00000609090 574 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms