Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 HSFY6P-201ENST00000445573 403 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 HSPE1P6-201ENST00000479457 291 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC108860.1-201ENST00000484521 383 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 Y_RNA.654-201ENST00000497848 106 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC026784.1-201ENST00000507986 352 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 RNU6-352P-201ENST00000516908 107 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 RNU6-273P-201ENST00000516937 96 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 RNU6-685P-201ENST00000517088 95 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AP001804.3-201ENST00000525146 880 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 SNRPGP16-201ENST00000533275 226 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 AP000763.2-201ENST00000540641 163 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 AL121576.1-201ENST00000556055 276 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC074050.1-201ENST00000563247 211 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 BNIP3P25-201ENST00000596023 559 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 BDH2P1-201ENST00000602288 736 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC104763.2-201ENST00000604179 382 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 DUSP12P1-201ENST00000612874 516 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AL160413.1-201ENST00000622780 310 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 AC112484.5-201ENST00000624189 228 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNX18Q96RF0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNX18Q96RF0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNX18Q96RF0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNX18Q96RF0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNX18Q96RF0 RNU6-1252P-201ENST00000363054 104 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 Y_RNA.167-201ENST00000363735 109 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 U3.12-201ENST00000364498 214 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 Y_RNA.414-201ENST00000384011 101 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 Y_RNA.530-201ENST00000384587 101 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 EI24P2-201ENST00000397776 1076 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 RN7SKP140-201ENST00000411196 284 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 RNA5SP111-201ENST00000411386 101 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 AC092809.3-201ENST00000415453 231 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 CALM2P2-201ENST00000428512 440 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 RPL21P112-201ENST00000434403 463 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 SCARNA18-201ENST00000459004 134 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 Y_RNA.632-201ENST00000459189 102 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 RNU7-66P-201ENST00000459469 62 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 Y_RNA.689-201ENST00000516589 107 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 RN7SKP258-201ENST00000517151 304 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 OR8R1P-201ENST00000543943 764 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AL355836.1-201ENST00000555951 870 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 MIR3942-201ENST00000585264 109 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AC067852.3-201ENST00000589177 561 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AC092747.3-201ENST00000603769 301 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.59□□□□□ -1.83
SNX18Q96RF0 AC064836.2-201ENST00000609491 462 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNX18Q96RF0 AL365204.3-201ENST00000612448 685 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 AL360181.4-201ENST00000621752 134 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 RNA5SP196-201ENST00000625967 102 ntBASIC3.59□□□□□ -1.83
SNX18Q96RF0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNX18Q96RF0 AC103710.2-202ENST00000641454 2853 ntBASIC3.59□□□□□ -1.84
SNX18Q96RF0 AP001350.1-201ENST00000601906 1524 ntBASIC3.59□□□□□ -1.84
SNX18Q96RF0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SNX18Q96RF0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SNX18Q96RF0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNX18Q96RF0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SNX18Q96RF0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNX18Q96RF0 Y_RNA.384-201ENST00000383909 102 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 RNU6-190P-201ENST00000384154 102 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 RNU6-1127P-201ENST00000384580 107 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 AC108032.1-201ENST00000416706 207 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 USP9YP20-201ENST00000419224 558 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 RPL31P12-201ENST00000422587 358 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 HMGB1P37-201ENST00000439613 609 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 AL162151.2-201ENST00000448875 158 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 RPS15AP27-201ENST00000449183 343 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 RPL23AP31-201ENST00000456160 467 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 RPL21P93-201ENST00000480465 489 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 RNU6-864P-201ENST00000516256 108 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 RN7SKP60-201ENST00000516985 239 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 AC091516.1-201ENST00000549191 703 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms