Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.18□□□□□ -2.22
AP1S3Q96PC3 MIR3198-2-201ENST00000577868 80 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 MIR4765-201ENST00000585007 77 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AP000238.1-201ENST00000608759 426 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 MIR7974-201ENST00000615835 79 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AC008443.7-201ENST00000622195 246 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AC092192.1-201ENST00000633154 1018 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC110491.1-201ENST00000562191 2010 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 RNU6-486P-201ENST00000363116 107 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 RNU6-115P-201ENST00000364310 107 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AL445183.3-201ENST00000414168 502 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 FABP5P14-201ENST00000437273 393 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 NDUFA5P7-201ENST00000452914 242 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 MTND2P24-201ENST00000453434 806 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC008549.1-201ENST00000512900 643 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 SNORA4.4-201ENST00000515921 135 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 BPTFP1-201ENST00000579209 492 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 BNIP3P22-201ENST00000593399 556 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC104763.2-201ENST00000604179 382 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 MIR502-201ENST00000606349 86 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC103710.2-201ENST00000609912 942 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC068944.2-201ENST00000610373 403 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 DUXAP10-204ENST00000612052 616 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AL163051.2-201ENST00000618976 735 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 MTND1P37-201ENST00000636562 264 ntBASIC1.17□□□□□ -2.22
AP1S3Q96PC3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
AP1S3Q96PC3 Y_RNA.510-201ENST00000384511 114 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 RNU6-878P-201ENST00000384578 110 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 SNORD116-23-201ENST00000384645 92 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 RNU2-33P-201ENST00000410344 192 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC007098.1-201ENST00000420122 367 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 PPP1R11P2-201ENST00000423543 382 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.16□□□□□ -2.22
AP1S3Q96PC3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AL353691.1-201ENST00000451332 387 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC244505.3-201ENST00000454598 187 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AL049873.1-201ENST00000480540 376 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC069528.1-202ENST00000482888 637 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC104564.1-201ENST00000493028 407 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 OR9N1P-202ENST00000494289 481 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 ANXA2P1-201ENST00000505539 926 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.16□□□□□ -2.22
AP1S3Q96PC3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
AP1S3Q96PC3 RANP3-201ENST00000530970 276 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
AP1S3Q96PC3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC024619.4-201ENST00000580924 316 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC005261.5-201ENST00000596280 355 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 BX248123.2-201ENST00000606318 124 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC004067.1-201ENST00000608733 700 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 AC093673.2-201ENST00000609674 331 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 HPVC1-201ENST00000629899 1198 ntBASIC1.16□□□□□ -2.22
AP1S3Q96PC3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
AP1S3Q96PC3 UBE2L2-201ENST00000254302 429 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
AP1S3Q96PC3 RNU6-796P-201ENST00000391086 107 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 RNU2-63P-201ENST00000410792 194 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC244453.4-201ENST00000419150 388 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC246680.2-201ENST00000422106 389 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 EIF4EP2-201ENST00000422816 654 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 Z93242.1-201ENST00000427102 353 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC244035.1-201ENST00000430042 390 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.15□□□□□ -2.23
AP1S3Q96PC3 RPL7P54-201ENST00000438336 674 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC092436.1-201ENST00000506450 503 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 SNORA26.10-201ENST00000516427 141 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC025918.2-201ENST00000558683 763 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC023824.3-201ENST00000569003 562 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC009974.1-201ENST00000608881 455 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AC010149.2-201ENST00000637608 315 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 AL359854.1-201ENST00000614203 1594 ntBASIC1.15□□□□□ -2.23
AP1S3Q96PC3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms