Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR3158-1-201ENST00000583596 81 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 Y_RNA.804-201ENST00000615262 101 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 AC006133.1-201ENST00000617106 264 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 U6.114-201ENST00000636407 96 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 AC100810.6-201ENST00000638068 285 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 OR4G1P-203ENST00000641984 1631 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VPS50Q96JG6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS50Q96JG6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS50Q96JG6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS50Q96JG6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 AL139276.1-201ENST00000311910 1001 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 Y_RNA.279-201ENST00000364763 95 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 DEFB109C-201ENST00000382575 264 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 DEFB109B-201ENST00000382656 264 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 SNORD37.1-201ENST00000390968 65 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 RNU6-1148P-201ENST00000410992 104 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 RN7SKP140-201ENST00000411196 284 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 RPL36AP6-201ENST00000435770 321 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 NEFMP1-201ENST00000443423 1006 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 ELOCP23-201ENST00000452014 332 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 PMCHL2-203ENST00000457791 237 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 snoU13.4-201ENST00000458916 104 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 RN7SL542P-201ENST00000467147 294 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 TRBV12-2-201ENST00000489763 344 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 AC104806.1-201ENST00000508720 308 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 AC008521.1-201ENST00000587471 187 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 MIR92B-201ENST00000607575 96 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 AP003122.6-201ENST00000623831 495 ntBASIC3.67□□□□□ -1.82
VPS50Q96JG6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS50Q96JG6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS50Q96JG6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS50Q96JG6 RNU6-173P-201ENST00000364215 104 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AL139397.2-201ENST00000404529 772 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC098614.3-201ENST00000438957 440 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 RANP8-201ENST00000444720 713 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 FABP5P13-201ENST00000452144 328 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 RPL38P4-201ENST00000502376 214 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 MTCO3P9-201ENST00000506989 781 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC117522.3-201ENST00000507974 584 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 RNU4-29P-201ENST00000515943 174 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 RNU6-123P-201ENST00000516163 102 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC023050.3-201ENST00000541142 333 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 ADI1P3-201ENST00000549509 470 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AL355810.1-201ENST00000614629 552 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AP001486.3-201ENST00000615334 372 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC007998.5-201ENST00000622938 237 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 CR392039.5-201ENST00000623201 510 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AC090617.10-201ENST00000624308 134 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS50Q96JG6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 OR4G2P-202ENST00000641004 1759 ntBASIC3.66□□□□□ -1.82
VPS50Q96JG6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VPS50Q96JG6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS50Q96JG6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.65□□□□□ -1.82
VPS50Q96JG6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.65□□□□□ -1.82
VPS50Q96JG6 MTND4P12-201ENST00000498999 1377 ntBASIC3.65□□□□□ -1.82
VPS50Q96JG6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS50Q96JG6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS50Q96JG6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS50Q96JG6 AL079305.1-201ENST00000623159 3008 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms