Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 Y_RNA.414-201ENST00000384011 101 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 Y_RNA.535-201ENST00000384612 99 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 EIF4E2P1-201ENST00000393781 255 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AL139039.1-201ENST00000401900 692 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AL590704.1-201ENST00000402856 794 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AL160275.3-201ENST00000423876 471 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 RPL7P2-201ENST00000427639 268 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AL590383.1-201ENST00000428602 75 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 NDUFA5P4-201ENST00000436704 385 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AF228730.2-201ENST00000438784 848 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 HMGB1P18-201ENST00000438801 619 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 PRPS1P1-201ENST00000445305 876 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 TRBVA-201ENST00000498804 316 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 HIGD1AP13-201ENST00000509878 289 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 ATP5F1P5-201ENST00000526403 760 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 MIR5692A1-201ENST00000580523 69 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 MIR3941-201ENST00000582572 103 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 HMGB1P50-201ENST00000605814 607 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 C2orf27A-204ENST00000623058 969 ntBASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 UBE2L2-201ENST00000254302 429 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 RNU6-600P-201ENST00000362524 99 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 RNU4-76P-201ENST00000364509 141 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 Y_RNA.813-201ENST00000364639 102 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 Y_RNA.399-201ENST00000383955 105 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 Y_RNA.509-201ENST00000384506 99 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 MIR30B-201ENST00000384850 88 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 RNA5SP219-201ENST00000390940 113 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 HMGN2P8-201ENST00000391458 268 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 CYCSP19-201ENST00000411715 316 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 RPS20P15-201ENST00000412792 311 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 BX323014.1-201ENST00000412876 237 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 BTF3L4P3-201ENST00000418879 476 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC008264.1-201ENST00000447612 367 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 TRBV12-2-201ENST00000489763 344 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 MTCO3P9-201ENST00000506989 781 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 MIR5685-201ENST00000579080 79 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 RNU1-30P-201ENST00000606575 163 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 MIR15A-201ENST00000607334 83 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC107294.1-201ENST00000609524 467 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AL121757.2-201ENST00000611223 313 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC103705.1-201ENST00000619013 241 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 USP8P1-201ENST00000494673 3183 ntBASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.53□□□□□ -1.84
CTHRC1Q96CG8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 MAPK10-372ENST00000641954 3413 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 RNU6-715P-201ENST00000365204 103 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.384-201ENST00000383909 102 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 RNU6-1011P-201ENST00000384668 107 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 RN7SKP202-201ENST00000410439 330 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 NDUFB4P7-201ENST00000423198 363 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AL591419.1-201ENST00000427423 339 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms