Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 HIF1AP1-201ENST00000553642 175 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.01□□□□□ -1.77
HPS3Q969F9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.01□□□□□ -1.77
HPS3Q969F9 MIR3186-201ENST00000577404 85 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 BNIP3P30-201ENST00000601184 574 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AL138889.2-201ENST00000603883 242 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AC022893.3-201ENST00000607665 437 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.01□□□□□ -1.77
HPS3Q969F9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
HPS3Q969F9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HPS3Q969F9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HPS3Q969F9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HPS3Q969F9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HPS3Q969F9 CEP170P1-201ENST00000502249 4587 ntBASIC4□□□□□ -1.77
HPS3Q969F9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HPS3Q969F9 TPTE2P4-201ENST00000258589 1605 ntBASIC4□□□□□ -1.77
HPS3Q969F9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HPS3Q969F9 UBE2L2-201ENST00000254302 429 ntBASIC4□□□□□ -1.77
HPS3Q969F9 AL139276.1-201ENST00000311910 1001 ntBASIC4□□□□□ -1.77
HPS3Q969F9 RNU6-451P-201ENST00000362921 107 ntBASIC4□□□□□ -1.77
HPS3Q969F9 SNORA70.4-201ENST00000365509 134 ntBASIC4□□□□□ -1.77
HPS3Q969F9 MIR7-3-201ENST00000384898 110 ntBASIC4□□□□□ -1.77
HPS3Q969F9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4□□□□□ -1.77
HPS3Q969F9 AL606923.1-201ENST00000406616 190 ntBASIC4□□□□□ -1.77
HPS3Q969F9 MTHFD2P2-201ENST00000407725 247 ntBASIC4□□□□□ -1.77
HPS3Q969F9 RNU6-1068P-201ENST00000410958 103 ntBASIC4□□□□□ -1.77
HPS3Q969F9 SNORA57.3-201ENST00000411095 141 ntBASIC4□□□□□ -1.77
HPS3Q969F9 BX842559.1-201ENST00000419615 532 ntBASIC4□□□□□ -1.77
HPS3Q969F9 RPL7P46-201ENST00000425129 740 ntBASIC4□□□□□ -1.77
HPS3Q969F9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4□□□□□ -1.77
HPS3Q969F9 TAAR7P-201ENST00000436141 242 ntBASIC4□□□□□ -1.77
HPS3Q969F9 AL353572.1-201ENST00000442490 417 ntBASIC4□□□□□ -1.77
HPS3Q969F9 HMGN2P16-201ENST00000456802 261 ntBASIC4□□□□□ -1.77
HPS3Q969F9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4□□□□□ -1.77
HPS3Q969F9 RBBP4P6-201ENST00000508098 202 ntBASIC4□□□□□ -1.77
HPS3Q969F9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4□□□□□ -1.77
HPS3Q969F9 RNU6-358P-201ENST00000516564 75 ntBASIC4□□□□□ -1.77
HPS3Q969F9 RNU6-685P-201ENST00000517088 95 ntBASIC4□□□□□ -1.77
HPS3Q969F9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4□□□□□ -1.77
HPS3Q969F9 AC134698.4-201ENST00000523451 826 ntBASIC4□□□□□ -1.77
HPS3Q969F9 AP005435.4-201ENST00000529514 284 ntBASIC4□□□□□ -1.77
HPS3Q969F9 BNIP3P9-201ENST00000603714 553 ntBASIC4□□□□□ -1.77
HPS3Q969F9 AC006077.1-201ENST00000604746 343 ntBASIC4□□□□□ -1.77
HPS3Q969F9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4□□□□□ -1.77
HPS3Q969F9 AC092628.2-201ENST00000622492 339 ntBASIC4□□□□□ -1.77
HPS3Q969F9 CR392039.5-201ENST00000623201 510 ntBASIC4□□□□□ -1.77
HPS3Q969F9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HPS3Q969F9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HPS3Q969F9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4□□□□□ -1.77
HPS3Q969F9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HPS3Q969F9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4□□□□□ -1.77
HPS3Q969F9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HPS3Q969F9 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
HPS3Q969F9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.99□□□□□ -1.77
HPS3Q969F9 AC090740.1-201ENST00000623193 2262 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 RPL7P26-201ENST00000333817 754 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 SNORD9-201ENST00000362566 104 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 RNU6-1167P-201ENST00000363227 94 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HPS3Q969F9 RNU6-1197P-201ENST00000391183 107 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 OR9R1P-201ENST00000412200 877 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HPS3Q969F9 AL035423.1-201ENST00000420331 213 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.99□□□□□ -1.77
HPS3Q969F9 AC007919.1-201ENST00000429380 217 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.99□□□□□ -1.77
HPS3Q969F9 HMGB1P31-201ENST00000437242 427 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.99□□□□□ -1.77
HPS3Q969F9 MTND4P18-201ENST00000447010 465 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 AL118520.1-201ENST00000450770 291 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.99□□□□□ -1.77
HPS3Q969F9 RPS15AP34-201ENST00000487776 387 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 RPL38P4-201ENST00000502376 214 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 AC117522.3-201ENST00000507974 584 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 AC098591.2-201ENST00000510152 315 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 RNU4-29P-201ENST00000515943 174 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.99□□□□□ -1.77
HPS3Q969F9 AC013553.2-201ENST00000604244 589 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 AC099654.14-201ENST00000638599 341 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 AL732372.2-225ENST00000642124 456 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 RIOK3P1-201ENST00000418778 1528 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.99□□□□□ -1.77
HPS3Q969F9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HPS3Q969F9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.99□□□□□ -1.77
HPS3Q969F9 AC091152.2-201ENST00000591628 2569 ntBASIC3.99□□□□□ -1.77
HPS3Q969F9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HPS3Q969F9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HPS3Q969F9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
HPS3Q969F9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HPS3Q969F9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HPS3Q969F9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HPS3Q969F9 RNU6-116P-201ENST00000384042 109 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 FGF7P8-201ENST00000402994 292 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 RNU6-193P-201ENST00000410977 107 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 RHEBP3-201ENST00000411920 351 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 AC092809.3-201ENST00000415453 231 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 Z85995.1-201ENST00000415547 335 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.98□□□□□ -1.77
HPS3Q969F9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms