Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF4Q92544 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 SNORD56.3-201ENST00000363507 71 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RNY4P14-201ENST00000363656 96 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RNU6-483P-201ENST00000384088 108 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RNU6-1181P-201ENST00000384191 106 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF4Q92544 UBA52P6-201ENST00000399822 382 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RPS4XP8-201ENST00000402039 771 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 MIR1277-201ENST00000408536 78 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RNU2-9P-201ENST00000410194 145 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RNU2-36P-201ENST00000410361 191 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 HMGN1P24-201ENST00000412282 298 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 USP9YP6-201ENST00000413550 854 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 MTATP6P18-201ENST00000417994 673 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 GPR143P-201ENST00000434155 205 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 HMGN2P20-201ENST00000437531 273 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 NFU1P2-201ENST00000448700 469 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 FDX1P2-201ENST00000450769 375 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC234775.1-201ENST00000454247 670 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RPL21P13-201ENST00000488305 481 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RPS15AP36-201ENST00000492022 382 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 RN7SL504P-201ENST00000494496 287 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC109635.4-202ENST00000531666 412 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AL163153.1-201ENST00000554223 283 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AL512360.1-201ENST00000555346 234 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC006504.3-201ENST00000586818 523 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 AP000907.4-201ENST00000604143 237 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC008277.2-201ENST00000605196 797 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AL121992.2-201ENST00000606262 256 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AP001330.5-201ENST00000607176 411 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AL355073.2-201ENST00000612106 557 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AL157817.1-201ENST00000614264 790 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC009161.2-201ENST00000624626 138 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC019226.1-201ENST00000625666 515 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 AC118273.1-201ENST00000525324 3006 ntBASIC3.09□□□□□ -1.91
TM9SF4Q92544 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF4Q92544 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.92
TM9SF4Q92544 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TM9SF4Q92544 SNORD56.2-201ENST00000363242 71 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 RNU6-1085P-201ENST00000363576 107 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 RNU6-108P-201ENST00000365558 107 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 Y_RNA.402-201ENST00000383972 102 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 RNU6-74P-201ENST00000384235 107 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 RNY3P14-201ENST00000384309 102 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 RNU6-754P-201ENST00000391166 107 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 UBE2FP1-201ENST00000416536 447 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 CCDC58P2-201ENST00000417131 366 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 MTCO1P20-201ENST00000425366 358 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 TIMM9P3-201ENST00000428659 274 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC093156.1-201ENST00000440382 670 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 AL671855.1-201ENST00000446875 1203 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 GAPDHP27-201ENST00000447427 1020 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC140076.1-201ENST00000449897 361 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 SNRPGP6-201ENST00000451124 220 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 SSXP4-201ENST00000451349 245 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 AL049714.1-201ENST00000466686 347 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC079382.1-201ENST00000493346 557 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC026801.2-201ENST00000515352 425 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 RNU1-103P-201ENST00000516502 125 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC107934.2-201ENST00000518653 310 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 HIGD1AP1-201ENST00000550979 275 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AL121603.1-201ENST00000553815 142 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 MIR4474-201ENST00000579189 78 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC015917.1-201ENST00000579654 510 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC012507.3-201ENST00000603556 477 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AP002360.4-201ENST00000606980 481 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC104458.1-201ENST00000608243 463 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC093838.1-201ENST00000613014 469 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms