Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPL30P5-201ENST00000494923 336 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC092436.1-201ENST00000506450 503 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 Y_RNA.689-201ENST00000516589 107 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RN7SKP219-201ENST00000516825 296 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RNA5SP471-201ENST00000516971 106 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RNA5SP503-201ENST00000517047 117 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 ATP5F1P5-201ENST00000526403 760 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AP005435.4-201ENST00000529514 284 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC092325.1-201ENST00000566449 554 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 SNORA59B-202ENST00000578183 701 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC006504.3-201ENST00000586818 523 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AL162413.1-201ENST00000603198 110 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC025946.2-201ENST00000603398 234 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 BRDTP1-201ENST00000605735 677 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC103710.2-202ENST00000641454 2853 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC007785.2-201ENST00000598627 1916 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 OTUD4P1-201ENST00000237841 3067 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AF127577.6-201ENST00000623352 2191 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 UBE2L2-201ENST00000254302 429 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AL139276.1-201ENST00000311910 1001 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 FRG1CP-201ENST00000358464 769 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 RNU6-1167P-201ENST00000363227 94 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 Y_RNA.255-201ENST00000364581 97 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 Y_RNA.453-201ENST00000384223 109 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AL591034.1-201ENST00000407447 340 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 RNU6-908P-201ENST00000410160 94 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 BTF3L4P3-201ENST00000418879 476 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 MTND4P25-201ENST00000441039 533 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC073415.1-201ENST00000449240 153 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 CEACAMP4-201ENST00000457676 421 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC092989.1-201ENST00000481235 277 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AL163973.1-201ENST00000484753 577 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 RPL39P36-201ENST00000490784 156 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 RBBP4P6-201ENST00000508098 202 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 APOOP4-201ENST00000513530 597 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 RNU6-123P-201ENST00000516163 102 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 RNU6-685P-201ENST00000517088 95 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 CASP1P1-201ENST00000526345 212 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 TRAV28-201ENST00000557548 323 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 MIR4703-201ENST00000577728 79 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 BNIP3P30-201ENST00000601184 574 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC098826.3-201ENST00000603823 466 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC022893.3-201ENST00000607665 437 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC130324.3-201ENST00000614165 542 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 uc_338.11-201ENST00000619132 160 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGB4Q8WW32 MAPK10-373ENST00000641983 6772 ntBASIC3.54□□□□□ -1.84
HMGB4Q8WW32 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 CKAP2P1-201ENST00000555477 2049 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AC118273.1-201ENST00000525324 3006 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 Y_RNA.111-201ENST00000363248 100 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 UBE2V1P2-201ENST00000397758 440 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MTCYBP8-201ENST00000422855 651 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AC007919.1-201ENST00000429380 217 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MRPS10P2-201ENST00000431226 381 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AL139415.2-201ENST00000431968 163 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 ATP5HP2-201ENST00000433885 485 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AL591212.2-201ENST00000433923 257 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms