Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 RNU1-140P-201ENST00000365040 165 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 RN7SKP69-201ENST00000365390 305 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 SNORA26.5-201ENST00000391215 123 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 ELOCP21-201ENST00000412558 336 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 AL391987.1-201ENST00000441025 200 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 HSPE1P13-201ENST00000451143 297 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 Y_RNA.651-201ENST00000459380 103 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 RPS4XP13-201ENST00000483219 789 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 MLLT10P2-201ENST00000506434 249 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 RNU6-436P-201ENST00000516171 114 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 Y_RNA.677-201ENST00000516401 85 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 MIR4260-201ENST00000583107 67 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.82□□□□□ -1.48
PTCD2Q8WV60 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 SNORD73B-201ENST00000364394 72 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 Y_RNA.294-201ENST00000364916 102 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 RNU6-969P-201ENST00000383900 105 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 Y_RNA.393-201ENST00000383936 102 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 RNU6-793P-201ENST00000384233 104 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 SNORD116-21-201ENST00000384507 92 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 SNORA40.5-201ENST00000391061 128 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 MIR888-201ENST00000401186 77 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 U3.40-201ENST00000408706 208 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 RNF10P1-201ENST00000418589 369 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 YPEL5P1-201ENST00000419731 367 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AIMP1P2-201ENST00000425294 312 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AC079780.1-201ENST00000428259 207 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AL356867.1-201ENST00000429623 299 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AL714022.1-201ENST00000439897 151 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AP000281.1-201ENST00000444036 316 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 snoU13.6-201ENST00000458785 104 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AC100832.1-201ENST00000471945 383 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 snoZ196.1-201ENST00000625269 89 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTCD2Q8WV60 AC004076.2-201ENST00000620532 3323 ntBASIC5.81□□□□□ -1.48
PTCD2Q8WV60 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 SNORA75.5-201ENST00000391291 81 ntBASIC5.8□□□□□ -1.48
PTCD2Q8WV60 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 SNORD125-201ENST00000459538 96 ntBASIC5.8□□□□□ -1.48
PTCD2Q8WV60 RPS23P2-201ENST00000463671 415 ntBASIC5.8□□□□□ -1.48
PTCD2Q8WV60 AL136038.1-201ENST00000497246 351 ntBASIC5.8□□□□□ -1.48
PTCD2Q8WV60 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.8□□□□□ -1.48
PTCD2Q8WV60 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PTCD2Q8WV60 OR9K1P-202ENST00000641111 3217 ntBASIC5.8□□□□□ -1.48
PTCD2Q8WV60 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCD2Q8WV60 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD2Q8WV60 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCD2Q8WV60 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PTCD2Q8WV60 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD2Q8WV60 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms