Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC131159.1-201ENST00000621854 213 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 NUP58P1-201ENST00000502546 1738 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AL157700.1-201ENST00000561973 1432 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AL021407.1-201ENST00000404531 386 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 RNU2-47P-201ENST00000410649 186 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 MTCYBP38-201ENST00000417160 1123 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 Z82209.1-201ENST00000422141 2135 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 COX7BP2-201ENST00000437976 242 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 MTCYBP34-201ENST00000439552 670 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 MTND3P1-201ENST00000441336 220 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 USP9YP10-201ENST00000454868 628 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 SUMO2P2-201ENST00000456482 255 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 RNU5A-4P-201ENST00000516588 111 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 MIR4474-201ENST00000579189 78 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC004009.2-201ENST00000623016 728 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC002064.3-201ENST00000623448 346 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 MIR1322-201ENST00000638013 71 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AP000776.1-201ENST00000530032 1663 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 MAPK10-266ENST00000641066 6555 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 SNORA4.1-201ENST00000364263 144 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 ERHP2-201ENST00000402323 299 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 MIR1276-201ENST00000408707 83 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL953862.1-201ENST00000423016 168 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL022400.1-201ENST00000423946 935 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL008629.1-201ENST00000438615 184 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC009238.1-201ENST00000442165 424 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC009237.6-201ENST00000446969 424 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 HMGB1P36-201ENST00000487709 576 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 RPS29P11-201ENST00000496507 171 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AP004371.1-201ENST00000525240 214 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 HSPE1P3-201ENST00000559254 309 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC087465.1-201ENST00000560574 245 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL354943.1-201ENST00000572103 781 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 MIR4303-201ENST00000581299 66 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC018714.1-201ENST00000605028 208 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL133507.1-201ENST00000605269 557 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC023158.2-201ENST00000614876 543 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AL590099.1-201ENST00000615276 138 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC012150.2-201ENST00000621300 544 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 AC008993.2-201ENST00000631744 806 ntBASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHROOM3Q8TF72 RNU6-374P-201ENST00000364146 108 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 RNU2-71P-201ENST00000411395 189 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 RPL17P12-201ENST00000413391 526 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 NDUFB4P6-201ENST00000436819 366 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 MTND1P31-201ENST00000449206 961 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL133217.1-201ENST00000450980 425 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 PABPC1P3-201ENST00000469174 459 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 RN7SKP287-201ENST00000516546 266 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC125611.2-201ENST00000551907 647 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC145350.1-201ENST00000567426 208 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL353778.1-201ENST00000603149 408 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 DUXAP11-201ENST00000603858 526 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC103710.4-201ENST00000609301 899 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AF246928.1-201ENST00000623768 87 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL356473.1-201ENST00000406203 1408 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 Y_RNA.169-201ENST00000363745 96 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 SNORA7.2-201ENST00000364446 145 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 USP9YP6-201ENST00000413550 854 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 EIF1AXP1-201ENST00000419267 435 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 PSMA6P3-201ENST00000428242 164 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 MTND5P25-201ENST00000430499 799 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 EZH2P1-201ENST00000431167 291 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms