Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC092125.1-201ENST00000562568 1995 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC016717.2-201ENST00000609089 5141 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 CCT4P2-201ENST00000233836 1548 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2□□□□□ -2.09
LINC01560Q8TB33 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2□□□□□ -2.09
LINC01560Q8TB33 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
LINC01560Q8TB33 RNU6-741P-201ENST00000383889 107 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 RN7SKP32-201ENST00000410167 303 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AL513331.1-201ENST00000411908 397 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AL365496.1-201ENST00000426885 215 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2□□□□□ -2.09
LINC01560Q8TB33 SAR1AP4-201ENST00000429225 591 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AC109583.1-201ENST00000432156 268 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AC129850.1-201ENST00000436203 508 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 UBE2FP3-201ENST00000436366 524 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 LARP1BP3-201ENST00000437229 869 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AL606662.1-201ENST00000445763 553 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AP1S2P1-201ENST00000457344 379 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AC055855.1-201ENST00000489563 579 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 CDC42P4-201ENST00000510507 563 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 RNU6-56P-201ENST00000516986 93 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AC068587.4-201ENST00000533893 186 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AC026464.5-201ENST00000562497 722 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2□□□□□ -2.09
LINC01560Q8TB33 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AC105148.1-201ENST00000604961 409 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AC018714.1-201ENST00000605028 208 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2□□□□□ -2.09
LINC01560Q8TB33 AL161629.2-201ENST00000615347 275 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AC073308.1-201ENST00000623696 305 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 AC110994.2-201ENST00000635481 492 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 MTND1P37-201ENST00000636562 264 ntBASIC2□□□□□ -2.09
LINC01560Q8TB33 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2□□□□□ -2.09
LINC01560Q8TB33 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LINC01560Q8TB33 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LINC01560Q8TB33 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2□□□□□ -2.09
LINC01560Q8TB33 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 SNORD114-1-201ENST00000362705 72 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 RNU6-223P-201ENST00000362830 107 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 RNU6-1214P-201ENST00000363650 109 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 RNU6-217P-201ENST00000384164 104 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 RNU2-33P-201ENST00000410344 192 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 HMGB1P11-201ENST00000413899 637 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 RPL7P37-201ENST00000425095 738 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AL591806.2-201ENST00000433122 173 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 RPS12P2-201ENST00000439728 269 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AL049734.2-201ENST00000441066 616 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC133134.1-201ENST00000466800 359 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 RPS20P22-201ENST00000473700 357 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC010631.1-201ENST00000474150 156 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC112673.1-201ENST00000513168 575 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC002545.1-201ENST00000592511 181 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC023043.3-201ENST00000593113 385 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC234772.3-201ENST00000602277 528 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC025754.2-201ENST00000606491 432 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC007038.2-201ENST00000608095 740 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AL031667.3-201ENST00000620124 655 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC097655.1-201ENST00000635075 318 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 MIR6733-201ENST00000635723 61 ntBASIC1.99□□□□□ -2.09
LINC01560Q8TB33 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
LINC01560Q8TB33 AC006378.2-201ENST00000623178 2476 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms