Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AC098831.1-201ENST00000440661 216 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AC072039.1-201ENST00000477611 581 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 TRBV12-1-201ENST00000479785 344 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 RNU1-40P-201ENST00000516816 164 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 RNU1-97P-201ENST00000516872 164 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AL132657.2-201ENST00000564417 358 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AL357094.1-201ENST00000603845 844 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AL139344.1-201ENST00000605228 195 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AC009237.15-201ENST00000610252 501 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AL161423.1-201ENST00000613700 262 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 SDR42E1P2-201ENST00000614861 481 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AP002791.1-201ENST00000623291 381 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AL356266.1-201ENST00000623311 483 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 AL390862.1-201ENST00000635467 1469 ntBASIC2.38□□□□□ -2.03
CCDC148Q8NFR7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 RNU4-51P-201ENST00000364206 140 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 RPL23AP29-201ENST00000397284 453 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 NDUFS5P4-201ENST00000412983 318 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 MED14P1-201ENST00000430517 648 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 MTND5P14-201ENST00000441481 1267 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 GPM6BP3-201ENST00000442797 145 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AL591719.1-201ENST00000444669 744 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 PSPHP1-201ENST00000450062 261 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 RNU6-717P-201ENST00000459076 104 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC092902.1-201ENST00000486999 259 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 RPS29P20-201ENST00000489592 171 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC113347.3-201ENST00000509113 148 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC104072.1-201ENST00000568817 668 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 MIR4648-201ENST00000580107 72 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AP000403.1-201ENST00000603349 851 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AL021997.1-201ENST00000605757 193 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC007349.4-201ENST00000608114 532 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AL589743.7-201ENST00000612637 233 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC092447.10-201ENST00000620607 1652 ntBASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC148Q8NFR7 AC110491.1-201ENST00000562191 2010 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 RNU6-114P-201ENST00000384704 105 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 SNORA40.2-201ENST00000390847 128 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AL023284.1-201ENST00000403956 276 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AL590084.1-201ENST00000407885 387 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 Z98742.2-201ENST00000431564 187 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 MTCO2P25-201ENST00000447065 681 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC025033.1-201ENST00000463883 194 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 DYNLL1P5-201ENST00000467158 270 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 RPS27P21-201ENST00000486977 252 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC079203.1-201ENST00000487972 404 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 RNU7-193P-201ENST00000516723 65 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 SCARNA3-201ENST00000517097 143 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 NACAP3-201ENST00000552100 481 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC025165.5-201ENST00000602802 578 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC024060.1-201ENST00000607052 494 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC013412.1-201ENST00000610687 192 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 TUG1_2.1-201ENST00000614234 87 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AL031601.2-202ENST00000622650 282 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC011477.1-204ENST00000623416 1325 ntBASIC2.36□□□□□ -2.03
CCDC148Q8NFR7 AC010889.1-201ENST00000566193 2666 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 Y_RNA.408-201ENST00000383987 102 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 AL356421.1-201ENST00000403255 413 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 U3.40-201ENST00000408706 208 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 AC013267.1-201ENST00000458227 267 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 KLF3P2-201ENST00000465138 268 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 MIR892C-201ENST00000516410 77 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 HSPE1P18-201ENST00000517602 280 ntBASIC2.35□□□□□ -2.03
CCDC148Q8NFR7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms