Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MTND2P24-201ENST00000453434 806 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 AC103987.1-201ENST00000473394 348 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 MTCYBP35-201ENST00000503630 1137 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 RNA5SP445-201ENST00000515889 115 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 RNU6-416P-201ENST00000516265 103 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 AC005832.3-201ENST00000537929 631 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 AC135279.1-201ENST00000543493 504 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 BNIP3P23-201ENST00000599655 511 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 BX248123.2-201ENST00000606318 124 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 U1.36-201ENST00000620684 176 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 AC104820.1-201ENST00000624183 307 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 HPVC1-201ENST00000629899 1198 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 MIR3199-2-201ENST00000636243 86 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 MTCO1P18-201ENST00000455518 1419 ntBASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SPTSSBQ8NFR3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 RNU6-778P-201ENST00000363269 103 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AL031679.1-201ENST00000400616 525 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 RNU2-36P-201ENST00000410361 191 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 USP9YP19-201ENST00000412165 485 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 USP9YP13-201ENST00000417797 480 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 RPL7P34-201ENST00000433316 712 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 HMGN2P3-201ENST00000433603 273 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AC015922.2-201ENST00000435593 184 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 HMGN2P5-201ENST00000436882 273 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AC005908.1-201ENST00000468701 347 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AL049873.1-201ENST00000480540 376 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 RNU1-103P-201ENST00000516502 125 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 RNU6-902P-201ENST00000517212 91 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AP004247.1-201ENST00000531556 1289 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 NACAP3-201ENST00000552100 481 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 ATP5F1P7-201ENST00000567330 760 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 AP003485.2-201ENST00000623636 610 ntBASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC0.78□□□□□ -2.28
SPTSSBQ8NFR3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 CBX3P1-201ENST00000325243 554 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 RNU6-252P-201ENST00000363232 107 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 SNORA22-201ENST00000383907 134 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 SNORA22C-201ENST00000384614 134 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 MIR29C-201ENST00000385231 88 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 MIR1294-201ENST00000408503 142 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 RN7SKP32-201ENST00000410167 303 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 CCDC58P2-201ENST00000417131 366 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 OFD1P11Y-201ENST00000418213 1177 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC008173.1-201ENST00000418901 264 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC005345.1-201ENST00000431868 217 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 SNRPGP13-201ENST00000442212 177 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AL353691.1-201ENST00000451332 387 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 KATNBL1P6-201ENST00000453433 915 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC112492.4-201ENST00000456549 352 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 RNA5SP57-201ENST00000459463 123 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AP001324.2-201ENST00000461163 319 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 RPS15AP36-201ENST00000492022 382 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 RPL38P4-201ENST00000502376 214 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 SAP18P1-201ENST00000512058 390 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 MIR1273D-201ENST00000577266 86 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AL050343.2-201ENST00000607338 280 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC024257.5-201ENST00000612739 531 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 AC013476.2-201ENST00000614456 459 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 ZNF849P-201ENST00000594711 1566 ntBASIC0.77□□□□□ -2.29
SPTSSBQ8NFR3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC0.76□□□□□ -2.29
SPTSSBQ8NFR3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SPTSSBQ8NFR3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms