Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PTENP1-201ENST00000447117 1215 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AL009048.1-201ENST00000450437 298 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 LARP1BP2-201ENST00000486594 519 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC138853.1-201ENST00000503549 823 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC114786.4-201ENST00000508771 728 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC114797.1-201ENST00000514003 728 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC091544.4-201ENST00000555268 342 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AL391261.3-201ENST00000557194 520 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC087465.1-201ENST00000560574 245 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AL161729.4-201ENST00000604650 476 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC106052.1-201ENST00000608029 497 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AL031601.2-202ENST00000622650 282 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 DDX43P2-201ENST00000604753 1354 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RNU6-1078P-201ENST00000364522 103 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RNU1-73P-201ENST00000383971 164 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RNU6-217P-201ENST00000384164 104 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RNU6-636P-201ENST00000384598 107 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RNU4-53P-201ENST00000410828 140 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 TPMTP3-201ENST00000411928 735 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC092047.1-201ENST00000424997 240 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 USP12PX-201ENST00000432383 1057 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 SNRPEP7-201ENST00000438350 220 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC004854.1-201ENST00000440356 349 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 DDX3P2-201ENST00000446138 111 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC128713.1-201ENST00000471495 306 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC104563.1-201ENST00000476147 376 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC021382.1-201ENST00000483523 359 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC010587.2-201ENST00000511727 448 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC024589.1-201ENST00000512207 263 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RNA5SP291-201ENST00000517222 105 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AP003497.1-201ENST00000528472 562 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AL512310.1-201ENST00000548639 172 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 SNRPGP18-201ENST00000553000 214 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 MIR3124-201ENST00000582636 67 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RPP40P2-201ENST00000603596 712 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC080013.3-201ENST00000606839 578 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AC013476.2-201ENST00000614456 459 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AL603758.1-201ENST00000618654 241 ntBASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDKL3Q8IVW4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 DDX10P1-201ENST00000448545 1933 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 RNU6-777P-201ENST00000364265 104 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 RNU6-744P-201ENST00000365557 107 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 XGY1-201ENST00000381172 446 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 RNU6-1316P-201ENST00000384242 108 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 RNU6-906P-201ENST00000384700 70 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AL356421.1-201ENST00000403255 413 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 MTCO2P8-201ENST00000412213 658 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 MYL8P-204ENST00000431574 518 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 Z80107.1-201ENST00000436830 412 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AL118520.1-201ENST00000450770 291 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AP1S2P1-201ENST00000457344 379 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 USP9YP25-201ENST00000457708 443 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 SUMO2P6-201ENST00000505273 288 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms