Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC108078.2-201ENST00000510750 236 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC026782.1-201ENST00000512952 449 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 RNU6-1271P-201ENST00000517049 105 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 MYL12BP1-201ENST00000569826 507 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 MIR6875-201ENST00000617506 72 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC010378.1-201ENST00000619270 362 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 AL137003.2-201ENST00000606924 2538 ntBASIC3.84□□□□□ -1.8
VRK3Q8IV63 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VRK3Q8IV63 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VRK3Q8IV63 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 RNU6-562P-201ENST00000362731 107 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 Y_RNA.574-201ENST00000384766 95 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 MIR3074-201ENST00000384885 81 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 PPIAP31-201ENST00000405422 495 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 RPL30P2-201ENST00000414021 291 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VRK3Q8IV63 CYP4F29P-201ENST00000420685 446 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 RPS26P47-201ENST00000427219 348 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC093151.1-201ENST00000427711 313 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC096644.2-201ENST00000429278 159 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 RPL23AP33-201ENST00000442301 452 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 FTH1P2-201ENST00000466086 412 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC026726.1-201ENST00000512859 601 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 RNU6-352P-201ENST00000516908 107 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 MIR2116-201ENST00000517221 80 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VRK3Q8IV63 AP002404.1-201ENST00000532005 451 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 OR8R1P-201ENST00000543943 764 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 MIR3160-1-201ENST00000577972 85 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VRK3Q8IV63 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC025588.3-201ENST00000604182 274 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 AL451142.2-201ENST00000429076 2090 ntBASIC3.83□□□□□ -1.8
VRK3Q8IV63 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VRK3Q8IV63 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VRK3Q8IV63 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VRK3Q8IV63 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VRK3Q8IV63 ZNF33CP-201ENST00000432492 2030 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VRK3Q8IV63 Y_RNA.153-201ENST00000363615 91 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VRK3Q8IV63 RNU6-213P-201ENST00000384051 104 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 Y_RNA.455-201ENST00000384230 98 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 Y_RNA.496-201ENST00000384444 101 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 Y_RNA.556-201ENST00000384677 113 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 RNA5SP219-201ENST00000390940 113 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VRK3Q8IV63 RNU6-516P-201ENST00000411381 104 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 RNU6-603P-201ENST00000411403 107 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 RPS6P12-201ENST00000432491 726 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 AL353597.2-202ENST00000434901 373 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 DYNLL1P5-201ENST00000467158 270 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.82□□□□□ -1.8
VRK3Q8IV63 RBBP4P6-201ENST00000508098 202 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 AC116337.1-201ENST00000509680 687 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.82□□□□□ -1.8
VRK3Q8IV63 RNU6-27P-201ENST00000516146 107 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 RNU6-1069P-201ENST00000516612 133 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 DEFB108D-201ENST00000527787 222 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.82□□□□□ -1.8
VRK3Q8IV63 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.82□□□□□ -1.8
VRK3Q8IV63 RN7SL703P-201ENST00000578485 302 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 AC113195.1-201ENST00000579952 141 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 MIR5692C1-201ENST00000585309 91 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 AL606490.9-201ENST00000603331 271 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 AC104695.3-201ENST00000604052 296 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.82□□□□□ -1.8
VRK3Q8IV63 AC004825.2-201ENST00000616634 455 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 AC103858.2-201ENST00000621471 543 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.82□□□□□ -1.8
VRK3Q8IV63 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VRK3Q8IV63 AC007529.1-201ENST00000418574 2178 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 ASNSP1-201ENST00000518311 1939 ntBASIC3.82□□□□□ -1.8
VRK3Q8IV63 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VRK3Q8IV63 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.81□□□□□ -1.8
VRK3Q8IV63 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VRK3Q8IV63 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.81□□□□□ -1.8
VRK3Q8IV63 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
VRK3Q8IV63 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VRK3Q8IV63 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VRK3Q8IV63 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
VRK3Q8IV63 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VRK3Q8IV63 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.81□□□□□ -1.8
VRK3Q8IV63 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
VRK3Q8IV63 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms