Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 SAR1AP4-201ENST00000429225 591 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 TRIM60P18-201ENST00000441518 828 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 UBE2D3P4-201ENST00000441973 436 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 ZNF114P1-201ENST00000453500 292 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AL049714.1-201ENST00000466686 347 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AC104563.1-201ENST00000476147 376 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AC010265.1-201ENST00000513509 211 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AP004247.1-201ENST00000531556 1289 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AC025281.1-201ENST00000567026 265 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 MIR3915-201ENST00000578518 97 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AC105224.1-201ENST00000587055 421 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AP000254.1-201ENST00000609934 520 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AL161431.1-201ENST00000618966 4205 ntBASIC3.2□□□□□ -1.9
NPHP3Q7Z494 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
NPHP3Q7Z494 AL356292.1-201ENST00000283110 373 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 RNU6-853P-201ENST00000364306 107 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 SNORA64-201ENST00000384674 134 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 MTCO1P17-201ENST00000411522 491 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 RPL23AP39-201ENST00000415533 405 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 RPL26P6-201ENST00000440913 438 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 MTND3P7-201ENST00000474435 343 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 RPL30P6-201ENST00000475925 342 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 RNU6-528P-201ENST00000516926 100 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC125611.2-201ENST00000551907 647 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 ROCK1P1-201ENST00000573767 549 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 MIR3921-201ENST00000577308 85 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC011451.2-201ENST00000604303 598 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 BCRP9-201ENST00000605312 388 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC009318.2-201ENST00000610917 651 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC008568.2-201ENST00000623862 2313 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC092447.7-201ENST00000422212 1621 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC012321.1-201ENST00000561622 1588 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 RNU6-97P-201ENST00000363387 104 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AL031577.2-201ENST00000404133 280 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 TPMTP3-201ENST00000411928 735 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC009518.2-201ENST00000418056 731 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 RPL7P5-201ENST00000471472 736 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC106872.3-201ENST00000495104 446 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 MTND1P22-201ENST00000510572 951 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AP003497.1-201ENST00000528472 562 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 OR4T1P-201ENST00000554933 911 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AP001004.1-201ENST00000582468 324 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AP001429.1-201ENST00000602568 530 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC002550.2-201ENST00000621246 394 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC008443.7-201ENST00000622195 246 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 AC091931.1-201ENST00000623488 728 ntBASIC3.19□□□□□ -1.9
NPHP3Q7Z494 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 RNU5A-1-201ENST00000362698 116 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 SNORA14A-201ENST00000364773 135 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 Y_RNA.338-201ENST00000365320 114 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 U8.9-201ENST00000365667 134 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 RNU6-769P-201ENST00000384407 104 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 OR4K11P-201ENST00000431829 904 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC092573.2-201ENST00000434546 243 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 RPL36AP6-201ENST00000435770 321 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 COX6CP2-201ENST00000444980 225 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 EPS15P1-201ENST00000448836 336 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms