Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RNU4-31P-201ENST00000384211 141 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AL355497.1-201ENST00000406262 551 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 MIR1285-1-201ENST00000408593 84 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AP003072.2-201ENST00000527756 676 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 SNRPGP16-201ENST00000533275 226 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 LINC00933-203ENST00000559812 219 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 HMGB1P24-202ENST00000615653 685 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC010329.5-201ENST00000623497 2174 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 RNU1-72P-201ENST00000362976 153 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 RNU6-997P-201ENST00000384725 107 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 RNA5SP193-201ENST00000410353 107 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 MRPS36P1-201ENST00000421291 307 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 RPS6P14-201ENST00000425165 719 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AL512661.1-201ENST00000434586 1253 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 RNU7-23P-201ENST00000459465 62 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC090897.2-201ENST00000581715 130 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC025588.4-201ENST00000615802 908 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 MIR147B-201ENST00000390185 80 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AL353718.1-201ENST00000451028 517 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 BX248409.1-201ENST00000455497 255 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 MED28P6-201ENST00000558776 231 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.69□□□□□ -2.3
CSMD3Q7Z407 AC079791.1-201ENST00000605356 973 ntBASIC0.69□□□□□ -2.3
CSMD3Q7Z407 MIR17-201ENST00000385012 84 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 USP9YP33-201ENST00000412220 421 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC104629.2-201ENST00000468627 598 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 OR5BM1P-201ENST00000512021 366 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 SNORA31.20-201ENST00000517111 133 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC083923.1-201ENST00000523708 376 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 GAS5-AS1-201ENST00000602767 694 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC123912.3-201ENST00000600907 1367 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC025263.3-201ENST00000622965 1396 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 ANAPC10P1-201ENST00000395991 556 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 SEPT2P1-201ENST00000419651 180 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC096751.1-202ENST00000502691 1067 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AP005902.1-201ENST00000521358 186 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC022662.1-201ENST00000580252 331 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AP001486.3-201ENST00000615334 372 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AL360181.4-201ENST00000621752 134 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 Y_RNA.390-201ENST00000383932 102 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 RNU6-1293P-201ENST00000384077 107 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 RN7SKP158-201ENST00000410453 326 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC015922.2-201ENST00000435593 184 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC104685.1-201ENST00000502445 371 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC023141.11-201ENST00000508864 202 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC004062.1-201ENST00000509926 645 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 RNU6-156P-201ENST00000621869 107 ntBASIC0.68□□□□□ -2.3
CSMD3Q7Z407 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CSMD3Q7Z407 AC130650.2-201ENST00000618736 2403 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 RNU6-105P-201ENST00000363909 104 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 SNORA46.1-201ENST00000391069 153 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 BZW1P2-201ENST00000473537 826 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 CYCSP23-201ENST00000519781 313 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 IMMP1LP2-201ENST00000552954 492 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 UBE2L4-201ENST00000587688 464 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC005021.1-201ENST00000608730 355 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC025594.3-201ENST00000613068 790 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 SNRPEP3-201ENST00000338402 276 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 SNORD14B-201ENST00000364533 90 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 RNA5SP127-201ENST00000411051 133 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms