Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AC099548.1-201ENST00000421443 426 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 SDAD1P3-201ENST00000427380 333 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AC093106.2-201ENST00000428212 385 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AL137159.1-201ENST00000452808 512 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AL049714.1-201ENST00000466686 347 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 RNU6-202P-201ENST00000515998 96 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AC084364.2-201ENST00000546924 395 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AL356473.1-201ENST00000406203 1408 ntBASIC1.51□□□□□ -2.17
CCDC171Q6TFL3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 DEFB108F-201ENST00000344638 222 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 SNORA25.9-201ENST00000365087 128 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 MICF-203ENST00000432679 129 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 VPS26AP1-201ENST00000483197 979 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 SUMO2P6-201ENST00000505273 288 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 AC022447.1-201ENST00000515358 464 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 AC090821.2-201ENST00000523552 176 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 DEFB108D-201ENST00000527787 222 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 EEF1B2P4-201ENST00000551398 348 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 AC008269.2-201ENST00000561915 1105 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 AC004775.1-201ENST00000607389 753 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 OR5H6-203ENST00000642105 978 ntBASIC1.5□□□□□ -2.17
CCDC171Q6TFL3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 TAF9BP2-201ENST00000400856 499 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 HMGB1P49-201ENST00000418882 569 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 MTND5P25-201ENST00000430499 799 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC098862.1-201ENST00000504991 413 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC010738.1-201ENST00000604970 987 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC138473.1-201ENST00000605717 526 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC097504.2-201ENST00000608088 454 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 U6.107-201ENST00000637108 79 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC233981.2-201ENST00000611524 1614 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 AC091812.1-201ENST00000432235 1948 ntBASIC1.49□□□□□ -2.17
CCDC171Q6TFL3 MIR421-201ENST00000365696 85 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 RNU6-444P-201ENST00000383988 108 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 MIR1287-201ENST00000408492 90 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 AL109913.1-201ENST00000421173 514 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 AC096920.1-201ENST00000423991 241 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 HMGB1P9-201ENST00000429856 646 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 MTCO3P17-201ENST00000443775 513 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 AC147055.4-201ENST00000504399 745 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 RNU6-1282P-201ENST00000516735 96 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 AL109659.3-201ENST00000624985 950 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 ZNF663P-202ENST00000641770 1131 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CCDC171Q6TFL3 RNA5SP125-201ENST00000364843 120 ntBASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 MIR499A-201ENST00000384903 122 ntBASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 LINC01347-201ENST00000417964 355 ntBASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 TAF9P1-201ENST00000445421 515 ntBASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 TAF9P2-201ENST00000454958 515 ntBASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 MIR892C-201ENST00000516410 77 ntBASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 AL773524.1-201ENST00000614065 229 ntBASIC1.47□□□□□ -2.17
CCDC171Q6TFL3 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 RNU6-272P-201ENST00000411028 104 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 RPS6P15-201ENST00000431996 751 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms