Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 LINC01355-201ENST00000566551 5444 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AL606537.1-201ENST00000607258 2011 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 Z95331.1-201ENST00000623075 23112 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 RN7SKP153-201ENST00000365026 316 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 SNORA66-201ENST00000384792 133 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 SNORA12.2-201ENST00000391040 156 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AC063979.1-201ENST00000415539 377 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AL353621.1-201ENST00000418219 243 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 MTCO1P5-201ENST00000433573 344 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AC073587.1-201ENST00000447093 876 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.638-201ENST00000459374 113 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AC007686.1-201ENST00000488511 463 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AC004980.4-201ENST00000513375 203 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 RNU5F-8P-201ENST00000515941 111 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AC009314.1-201ENST00000603871 304 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 FAM25E-202ENST00000608562 189 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 AC007529.1-201ENST00000418574 2178 ntBASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXR1Q6PIV2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
FOXR1Q6PIV2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.15□□□□□ -1.58
FOXR1Q6PIV2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FOXR1Q6PIV2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
FOXR1Q6PIV2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.15□□□□□ -1.58
FOXR1Q6PIV2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
FOXR1Q6PIV2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 SNORA17.1-201ENST00000362945 126 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.82-201ENST00000363000 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.92-201ENST00000363043 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 U3.6-201ENST00000363622 211 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 RNA5SP28-201ENST00000363841 119 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.235-201ENST00000364412 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.306-201ENST00000365015 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.308-201ENST00000365043 101 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.312-201ENST00000365089 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.322-201ENST00000365151 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.343-201ENST00000365354 112 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 RNU4-30P-201ENST00000410245 143 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 MTCO1P39-201ENST00000426148 480 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 AL049745.1-201ENST00000433953 286 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.650-201ENST00000459002 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 RN7SL817P-201ENST00000480777 288 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 SNORA31.3-201ENST00000516029 96 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.777-201ENST00000516982 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 RN7SL356P-201ENST00000582228 248 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 MIR548AC-201ENST00000585049 88 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.771-201ENST00000598668 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 MIR8076-201ENST00000611401 83 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.789-201ENST00000622480 102 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 NEAT1-202ENST00000501122 22743 ntBASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
FOXR1Q6PIV2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 RNU6-989P-201ENST00000362756 107 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 RNA5SP123-201ENST00000363244 119 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 RNA5SP205-201ENST00000364653 136 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.272-201ENST00000364696 102 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 RNU6-1179P-201ENST00000384667 107 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 MIR135A2-201ENST00000384854 100 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 MIR600-201ENST00000385007 98 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 MIR195-201ENST00000385194 87 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.580-201ENST00000391004 95 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 AC016397.1-201ENST00000412463 242 ntBASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXR1Q6PIV2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms