Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF43Q68DV7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF43Q68DV7 RNU6-1266P-201ENST00000362794 105 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 snoU2_19.2-201ENST00000363024 80 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 RNU6-637P-201ENST00000384050 107 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 RNU6-45P-201ENST00000384471 107 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 SNORA37-201ENST00000384504 129 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 MIR628-201ENST00000385229 95 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 RNU6-754P-201ENST00000391166 107 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 RPS27AP12-201ENST00000429552 465 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 RPL29P29-201ENST00000448725 423 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 snoU13.7-201ENST00000459220 104 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 RPL23AP65-201ENST00000475608 468 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 RPS29P26-201ENST00000477483 171 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 RNA5SP360-201ENST00000516555 118 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 AP002392.1-201ENST00000537692 208 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 SULT1C2P2-201ENST00000562517 294 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 RN7SL652P-201ENST00000577769 300 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 AC023043.4-201ENST00000612081 449 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AC007998.5-201ENST00000622938 237 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AC021753.1-201ENST00000635724 168 ntBASIC4.82□□□□□ -1.64
RNF43Q68DV7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF43Q68DV7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF43Q68DV7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC027228.2-201ENST00000567141 2154 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 Y_RNA.122-201ENST00000363331 96 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 MIR92A2-201ENST00000385299 75 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 SNORD73A-201ENST00000386062 65 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC092809.3-201ENST00000415453 231 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 RPL23AP22-201ENST00000437556 453 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC008958.1-201ENST00000511047 682 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC007016.1-201ENST00000512110 244 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC004584.2-201ENST00000570407 410 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 MZT1P2-201ENST00000604387 248 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 AL160281.1-201ENST00000605307 311 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 RNU6-85P-201ENST00000605989 107 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 MIR7154-201ENST00000620673 73 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 AC110801.1-201ENST00000623590 212 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF43Q68DV7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AL445487.1-201ENST00000415694 1580 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF43Q68DV7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF43Q68DV7 AL137003.2-201ENST00000606924 2538 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RNF43Q68DV7 OR56B2P-202ENST00000641377 2453 ntBASIC4.81□□□□□ -1.64
RNF43Q68DV7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 AC005332.5-201ENST00000591222 2919 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 RNU6-682P-201ENST00000363843 106 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 RNU6-740P-201ENST00000364734 105 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 MIR134-201ENST00000385258 73 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AL030996.1-201ENST00000411430 235 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 DAP3P1-201ENST00000441522 278 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AL162591.2-201ENST00000449634 317 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AC053481.1-201ENST00000467217 306 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AC011276.1-201ENST00000469688 323 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AC074198.2-201ENST00000508153 258 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AC008716.1-201ENST00000511084 513 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 RNU6-1278P-201ENST00000516130 107 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 Y_RNA.713-201ENST00000517013 96 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AP006587.4-201ENST00000526053 529 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AMZ2P1-203ENST00000565833 850 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 AL591516.1-201ENST00000611326 274 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms