Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
E4F1Q66K89 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
E4F1Q66K89 AC074029.4-201ENST00000624796 1859 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.41□□□□□ -1.7
E4F1Q66K89 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
E4F1Q66K89 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.41□□□□□ -1.7
E4F1Q66K89 MTND5P16-201ENST00000460269 1703 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
E4F1Q66K89 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.4□□□□□ -1.7
E4F1Q66K89 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.4□□□□□ -1.7
E4F1Q66K89 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
E4F1Q66K89 RNU6-173P-201ENST00000364215 104 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
E4F1Q66K89 RNU6-1040P-201ENST00000383974 107 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 SNORA75B-201ENST00000384053 137 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 RNU6-629P-201ENST00000384061 103 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 RNU6-214P-201ENST00000384130 107 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
E4F1Q66K89 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.4□□□□□ -1.71
E4F1Q66K89 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.4□□□□□ -1.71
E4F1Q66K89 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.4□□□□□ -1.71
E4F1Q66K89 AL500522.2-201ENST00000448562 343 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.4□□□□□ -1.71
E4F1Q66K89 RN7SL481P-201ENST00000477764 299 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 HSPE1P6-201ENST00000479457 291 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 Y_RNA.708-201ENST00000516950 96 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 RN7SKP295-201ENST00000517264 153 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 AC087854.1-201ENST00000519706 414 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 AP004371.1-201ENST00000525240 214 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
E4F1Q66K89 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.4□□□□□ -1.71
E4F1Q66K89 FAM60BP-201ENST00000578364 658 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 MIR5692A1-201ENST00000580523 69 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 AC068790.4-201ENST00000602474 263 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 AP000654.2-201ENST00000605633 586 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 AC098657.3-201ENST00000620434 263 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
E4F1Q66K89 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.4□□□□□ -1.71
E4F1Q66K89 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.4□□□□□ -1.71
E4F1Q66K89 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
E4F1Q66K89 LINC02471-203ENST00000641941 4752 ntBASIC4.4□□□□□ -1.71
E4F1Q66K89 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.39□□□□□ -1.71
E4F1Q66K89 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 AC138393.1-203ENST00000327086 343 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 SNORD3E-201ENST00000362899 217 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 Y_RNA.112-201ENST00000363250 102 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 Y_RNA.144-201ENST00000363521 113 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 RNU6-266P-201ENST00000364225 107 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 RNU6-890P-201ENST00000384121 107 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 RNU6-306P-201ENST00000384617 107 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 RNU6-1106P-201ENST00000390845 107 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 ATG3P1-201ENST00000419507 911 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.39□□□□□ -1.71
E4F1Q66K89 MTCO1P39-201ENST00000426148 480 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 AL359672.1-201ENST00000442302 409 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 AP000926.1-201ENST00000479573 241 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 RPL7P42-201ENST00000481005 679 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 AC026801.1-201ENST00000497178 464 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.39□□□□□ -1.71
E4F1Q66K89 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.39□□□□□ -1.71
E4F1Q66K89 AC097473.1-201ENST00000508142 408 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 RNU6-976P-201ENST00000516086 111 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.39□□□□□ -1.71
E4F1Q66K89 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.39□□□□□ -1.71
E4F1Q66K89 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.39□□□□□ -1.71
E4F1Q66K89 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.39□□□□□ -1.71
E4F1Q66K89 AC100830.2-201ENST00000581636 240 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 RNA5SP108-201ENST00000605921 117 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.39□□□□□ -1.71
E4F1Q66K89 AL023881.1-201ENST00000621088 301 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 AC091925.1-201ENST00000623204 462 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.39□□□□□ -1.71
E4F1Q66K89 ZNF285B-201ENST00000561698 1767 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.39□□□□□ -1.71
E4F1Q66K89 AL356489.2-201ENST00000566968 3528 ntBASIC4.39□□□□□ -1.71
E4F1Q66K89 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
E4F1Q66K89 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
E4F1Q66K89 AL365440.1-201ENST00000436135 2167 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
E4F1Q66K89 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
E4F1Q66K89 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
E4F1Q66K89 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
E4F1Q66K89 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 MIR423-201ENST00000362201 94 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 RNU6-95P-201ENST00000384697 107 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 MIR192-201ENST00000384915 110 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 AL356057.3-201ENST00000402607 340 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 Z98941.1-201ENST00000407764 100 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 RNU6-1050P-201ENST00000410388 107 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 AL451062.2-201ENST00000427515 271 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 COX6B1P7-201ENST00000430845 235 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 AC236972.1-201ENST00000433225 199 ntBASIC4.38□□□□□ -1.71
E4F1Q66K89 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms