Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC110588.1-201ENST00000559699 137 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 BDH2P1-201ENST00000602288 736 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 PRR13P7-201ENST00000605538 430 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 AC006157.1-201ENST00000611750 366 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 AL162373.1-201ENST00000620433 407 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC074029.4-201ENST00000624796 1859 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.176-201ENST00000363815 109 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.193-201ENST00000363979 102 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.404-201ENST00000383978 102 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 MIR30B-201ENST00000384850 88 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AL139039.1-201ENST00000401900 692 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC093151.1-201ENST00000427711 313 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 HMGB1P27-201ENST00000431429 603 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AL160004.2-201ENST00000432935 350 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC017037.1-201ENST00000508460 471 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC006499.6-201ENST00000511169 607 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.661-201ENST00000516003 99 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 RNU6-840P-201ENST00000517275 65 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 IGLV3-26-201ENST00000520756 302 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AP002404.1-201ENST00000532005 451 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AL161670.1-201ENST00000554348 137 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 MIR4458-201ENST00000578872 75 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 MIR5692A1-201ENST00000580523 69 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC005014.2-201ENST00000607795 599 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC007485.1-201ENST00000616755 206 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AL138721.1-201ENST00000616756 179 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 FP236240.3-201ENST00000623061 327 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 AC119674.1-207ENST00000641355 633 ntBASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
USPL1Q5W0Q7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.428-201ENST00000384078 102 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.557-201ENST00000384680 107 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 MIR7-3-201ENST00000384898 110 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 MIR153-1-201ENST00000384914 90 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AL590632.1-201ENST00000424289 371 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AC008267.5-201ENST00000424928 265 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AL591212.2-201ENST00000433923 257 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 CKS1BP5-201ENST00000434172 273 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 RPL12P25-201ENST00000455592 494 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 RNU7-138P-201ENST00000459479 64 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 RPL5P30-201ENST00000465511 891 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 SNORD116.3-201ENST00000517176 78 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 MIR6868-201ENST00000611215 58 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AL161423.1-201ENST00000613700 262 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AC007792.1-201ENST00000623023 402 ntBASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
USPL1Q5W0Q7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AL161912.2-201ENST00000565707 3007 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 RNU6-702P-201ENST00000364982 107 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 RNU6-76P-201ENST00000384060 104 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 RNU6-907P-201ENST00000390924 102 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 RNU6-882P-201ENST00000391025 103 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 RPS4XP7-201ENST00000406274 780 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 RNA5SP146-201ENST00000410743 123 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC092809.3-201ENST00000415453 231 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC114482.1-201ENST00000418010 247 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC096644.2-201ENST00000429278 159 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC091286.1-201ENST00000431233 461 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC087884.1-201ENST00000469738 328 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms