Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC100870.1-201ENST00000522035 505 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC109635.4-202ENST00000531666 412 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC093012.1-202ENST00000549403 582 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AL121603.1-201ENST00000553815 142 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AL355375.2-201ENST00000574825 175 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 KLKP1-201ENST00000595979 403 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AL022099.1-201ENST00000604551 712 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC016727.1-205ENST00000605437 569 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC004696.1-201ENST00000614345 607 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 U7.8-201ENST00000619968 63 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC090574.1-201ENST00000623186 233 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 MTND1P37-201ENST00000636562 264 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC009093.8-201ENST00000641769 292 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 Y_RNA.184-201ENST00000363884 108 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RNU4-76P-201ENST00000364509 141 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RNU6-882P-201ENST00000391025 103 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 SNORA48.7-201ENST00000391302 135 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC110754.1-201ENST00000399740 601 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 FAT1P1-201ENST00000406588 507 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RNA5SP111-201ENST00000411386 101 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RPS7P15-201ENST00000415804 584 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC006989.1-201ENST00000427212 131 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RPL7L1P10-201ENST00000427790 463 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 CYCSP4-201ENST00000429682 331 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC090774.1-201ENST00000435925 246 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 HMGB3P11-201ENST00000440127 604 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RNU7-180P-201ENST00000459240 63 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC004801.2-202ENST00000463559 283 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AP001086.1-201ENST00000494882 321 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RN7SKP83-201ENST00000516512 178 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RANP3-201ENST00000530970 276 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 HPRT1P3-201ENST00000539521 576 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AP000763.2-201ENST00000540641 163 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 PSMA3P-201ENST00000555485 635 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AL118558.2-201ENST00000556294 238 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 DPPA3P3-201ENST00000603842 430 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AP003355.3-201ENST00000623465 114 ntBASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC178Q5BJE1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 SNORD9-201ENST00000362566 104 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RNU4-79P-201ENST00000362764 141 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 Y_RNA.378-201ENST00000365652 113 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 MIR449B-201ENST00000384995 97 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RPS20P15-201ENST00000412792 311 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 AL451054.2-201ENST00000420896 202 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RPL7P46-201ENST00000425129 740 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 NDUFB1P1-201ENST00000435191 180 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RPL36AP6-201ENST00000435770 321 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RPL9P32-201ENST00000464118 620 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 FGF7P4-201ENST00000509595 295 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RNU6-123P-201ENST00000516163 102 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 OR4H12P-201ENST00000556269 907 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 RPL23AP84-201ENST00000571193 464 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 MIR1254-2-201ENST00000579553 63 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 AC006116.10-201ENST00000591836 581 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 AC104237.2-201ENST00000612456 443 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 MFSD8-233ENST00000641482 4860 ntBASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC178Q5BJE1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC178Q5BJE1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms