Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AP005136.1-201ENST00000579765 429 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AC040174.2-201ENST00000602701 465 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AC025588.2-201ENST00000604851 466 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 OR4G1P-203ENST00000641984 1631 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 RNU6-582P-201ENST00000362989 107 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 RNU4-42P-201ENST00000364738 142 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 Y_RNA.540-201ENST00000384638 111 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.61□□□□□ -2.15
RFX7Q2KHR2 RPL23AP6-201ENST00000446637 472 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 RPL12P25-201ENST00000455592 494 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 snoU109.1-201ENST00000459339 135 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 MTCO1P31-201ENST00000506355 492 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.61□□□□□ -2.15
RFX7Q2KHR2 RNA5SP220-201ENST00000516298 104 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 SNORA48.10-201ENST00000516965 160 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 LINC00933-203ENST00000559812 219 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.61□□□□□ -2.15
RFX7Q2KHR2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.61□□□□□ -2.15
RFX7Q2KHR2 AC022387.2-201ENST00000604050 448 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 AC242628.1-201ENST00000606810 391 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 STMN1P1-201ENST00000617809 440 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 AC109454.4-201ENST00000623411 649 ntBASIC1.61□□□□□ -2.15
RFX7Q2KHR2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.61□□□□□ -2.15
RFX7Q2KHR2 RNU6-203P-201ENST00000384038 104 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 RNU6-220P-201ENST00000390919 107 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 SNORA40.6-201ENST00000391153 128 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 RN7SKP158-201ENST00000410453 326 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 RPL23AP16-201ENST00000441715 421 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC015724.1-201ENST00000478577 156 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC093801.2-201ENST00000503966 1050 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC092436.3-201ENST00000511788 257 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 CBX3P7-201ENST00000532876 502 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC084364.2-201ENST00000546924 395 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RFX7Q2KHR2 AC111188.2-201ENST00000529697 1387 ntBASIC1.6□□□□□ -2.15
RFX7Q2KHR2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RFX7Q2KHR2 MIR96-201ENST00000362288 78 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 OR1L1-202ENST00000373686 1083 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.59□□□□□ -2.15
RFX7Q2KHR2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RFX7Q2KHR2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AL589880.1-201ENST00000448271 287 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 RPS20P24-201ENST00000457473 361 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AC022447.1-201ENST00000515358 464 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 RNA5SP480-201ENST00000516840 109 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 PSMA3P-201ENST00000555485 635 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AC027104.1-201ENST00000563702 681 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AC136443.5-201ENST00000603741 370 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AC055876.5-201ENST00000605667 259 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AC092608.3-201ENST00000625017 386 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 AL590396.2-201ENST00000636511 1041 ntBASIC1.59□□□□□ -2.15
RFX7Q2KHR2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.59□□□□□ -2.15
RFX7Q2KHR2 RNU6-1151P-201ENST00000384684 107 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 MIR1290-201ENST00000408735 78 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.59□□□□□ -2.16
RFX7Q2KHR2 CYCSP48-201ENST00000417124 323 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 RPS3AP44-201ENST00000425466 790 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AL035410.1-201ENST00000427409 427 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 RPS6P15-201ENST00000431996 751 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AC092573.2-201ENST00000434546 243 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.59□□□□□ -2.16
RFX7Q2KHR2 PIGFP3-201ENST00000441918 722 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AC027575.1-201ENST00000481064 460 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AC055855.1-201ENST00000489563 579 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AF131216.2-201ENST00000512316 564 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AP005597.4-201ENST00000526762 229 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.59□□□□□ -2.16
RFX7Q2KHR2 OR8K4P-201ENST00000534608 872 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AC084033.1-201ENST00000550830 633 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 MIR4299-201ENST00000577899 72 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.59□□□□□ -2.16
RFX7Q2KHR2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
RFX7Q2KHR2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms