Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AL138713.1-201ENST00000624026 2130 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.11□□□□□ -1.75
SF3B3Q15393 U6.98-201ENST00000637157 84 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B3Q15393 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B3Q15393 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B3Q15393 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B3Q15393 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B3Q15393 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B3Q15393 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.1□□□□□ -1.75
SF3B3Q15393 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B3Q15393 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B3Q15393 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SF3B3Q15393 Y_RNA.22-201ENST00000362492 102 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B3Q15393 EEF1A1P40-201ENST00000412883 573 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 AL353678.1-201ENST00000422735 741 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.1□□□□□ -1.75
SF3B3Q15393 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B3Q15393 RAC1P7-201ENST00000445367 377 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B3Q15393 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B3Q15393 RPS4XP2-201ENST00000458402 793 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B3Q15393 HIGD1AP3-201ENST00000515857 278 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 SNORD27.1-201ENST00000516319 72 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 Y_RNA.675-201ENST00000516389 149 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 RNU1-103P-201ENST00000516502 125 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 OR5BN1P-201ENST00000532955 829 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 AC004024.1-201ENST00000549244 247 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.1□□□□□ -1.75
SF3B3Q15393 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B3Q15393 AC010525.2-201ENST00000590920 195 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 AP001429.1-201ENST00000602568 530 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 AC103710.2-201ENST00000609912 942 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 RNVU1-4-201ENST00000612985 164 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 AL590099.1-201ENST00000615276 138 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.1□□□□□ -1.75
SF3B3Q15393 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.1□□□□□ -1.75
SF3B3Q15393 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.1□□□□□ -1.75
SF3B3Q15393 RIOK3P1-201ENST00000418778 1528 ntBASIC4.1□□□□□ -1.75
SF3B3Q15393 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B3Q15393 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B3Q15393 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.09□□□□□ -1.75
SF3B3Q15393 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SF3B3Q15393 HSPA8P1-201ENST00000425843 1833 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AL513302.2-201ENST00000562313 1842 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SF3B3Q15393 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SF3B3Q15393 SNORA7.2-201ENST00000364446 145 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 RNU6-39P-201ENST00000384344 107 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AL122016.1-201ENST00000403365 367 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AL356432.1-201ENST00000405809 419 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AC244098.2-201ENST00000422068 99 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 SRIP2-201ENST00000428470 166 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 RPS20P5-201ENST00000434808 360 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.09□□□□□ -1.75
SF3B3Q15393 AC008264.1-201ENST00000447612 367 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.09□□□□□ -1.75
SF3B3Q15393 EIF4EP3-201ENST00000498782 656 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 RPL38P4-201ENST00000502376 214 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 MTCO3P9-201ENST00000506989 781 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.09□□□□□ -1.75
SF3B3Q15393 MTCO3P44-201ENST00000510977 541 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 RNA5SP341-201ENST00000516261 117 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 SUB1P1-201ENST00000524415 382 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AC243972.3-201ENST00000539655 198 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.09□□□□□ -1.75
SF3B3Q15393 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.09□□□□□ -1.75
SF3B3Q15393 AL121576.1-201ENST00000556055 276 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.09□□□□□ -1.75
SF3B3Q15393 COX6CP3-201ENST00000580869 223 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 YWHAQP7-201ENST00000603536 658 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AL132765.2-201ENST00000610812 351 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.09□□□□□ -1.75
SF3B3Q15393 AC002550.2-201ENST00000621246 394 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 AC100810.6-201ENST00000638068 285 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 CEP170P1-201ENST00000502249 4587 ntBASIC4.09□□□□□ -1.75
SF3B3Q15393 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B3Q15393 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.08□□□□□ -1.76
SF3B3Q15393 RNU1-70P-201ENST00000362618 164 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 RNU4-79P-201ENST00000362764 141 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 RNU6-996P-201ENST00000365438 107 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 Y_RNA.367-201ENST00000365544 101 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B3Q15393 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SF3B3Q15393 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B3Q15393 AL162578.1-201ENST00000406202 378 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 RNU2-62P-201ENST00000410868 191 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.08□□□□□ -1.76
SF3B3Q15393 MTCO3P46-201ENST00000425787 232 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.08□□□□□ -1.76
SF3B3Q15393 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.08□□□□□ -1.76
SF3B3Q15393 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B3Q15393 AL118496.2-201ENST00000448300 230 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AC108059.3-201ENST00000456388 214 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AL049714.1-201ENST00000466686 347 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AL163973.1-201ENST00000484753 577 ntBASIC4.08□□□□□ -1.76
SF3B3Q15393 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B3Q15393 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms