Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC118942.1-201ENST00000529674 1035 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.67□□□□□ -2.14
FOXF1Q12946 AP000873.5-201ENST00000533906 236 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.67□□□□□ -2.14
FOXF1Q12946 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.67□□□□□ -2.14
FOXF1Q12946 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
FOXF1Q12946 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.67□□□□□ -2.14
FOXF1Q12946 NRBF2P1-201ENST00000587407 859 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 BNIP3P26-201ENST00000600827 554 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 RPP40P2-201ENST00000603596 712 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 AC012493.3-201ENST00000604494 112 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
FOXF1Q12946 AC093838.1-201ENST00000613014 469 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 AC013476.2-201ENST00000614456 459 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 AC006213.4-201ENST00000616184 634 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 AL449363.1-201ENST00000617815 186 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.67□□□□□ -2.14
FOXF1Q12946 AL159972.1-201ENST00000625150 448 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 AC007785.2-201ENST00000598627 1916 ntBASIC1.67□□□□□ -2.14
FOXF1Q12946 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
FOXF1Q12946 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
FOXF1Q12946 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AL354685.2-201ENST00000448218 1447 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXF1Q12946 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.66□□□□□ -2.14
FOXF1Q12946 AL359851.1-201ENST00000569460 4997 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
FOXF1Q12946 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
FOXF1Q12946 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 RNU6-560P-201ENST00000364007 108 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 MIR514A1-201ENST00000385133 98 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 RNU6-1000P-201ENST00000391066 106 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.66□□□□□ -2.14
FOXF1Q12946 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.66□□□□□ -2.14
FOXF1Q12946 TIMM9P2-201ENST00000419324 266 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC099548.1-201ENST00000421443 426 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXF1Q12946 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
FOXF1Q12946 IFNA11P-201ENST00000446352 526 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC092155.2-201ENST00000454675 477 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
FOXF1Q12946 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXF1Q12946 snoU13.15-201ENST00000459407 104 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
FOXF1Q12946 RPS27P21-201ENST00000486977 252 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 FAM172BP-201ENST00000487497 1089 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 RPS29P11-201ENST00000496507 171 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 MTCYBP17-201ENST00000503579 789 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.66□□□□□ -2.14
FOXF1Q12946 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.66□□□□□ -2.14
FOXF1Q12946 BTF3P12-201ENST00000519620 469 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXF1Q12946 AL132657.2-201ENST00000564417 358 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXF1Q12946 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.66□□□□□ -2.14
FOXF1Q12946 MIR3117-201ENST00000584034 78 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 MIR4658-201ENST00000584344 65 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AL355877.2-201ENST00000603670 358 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC135507.1-201ENST00000607214 561 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC092574.1-201ENST00000609771 420 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AC009090.3-201ENST00000616553 565 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 AL031601.2-202ENST00000622650 282 ntBASIC1.66□□□□□ -2.14
FOXF1Q12946 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.66□□□□□ -2.14
FOXF1Q12946 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
FOXF1Q12946 AC092447.10-201ENST00000620607 1652 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AL356292.1-201ENST00000283110 373 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
FOXF1Q12946 AL161781.1-201ENST00000354277 403 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 RNU6-741P-201ENST00000383889 107 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 U3.20-201ENST00000390909 217 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 MIR1289-2-201ENST00000408360 111 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 RNU6-1140P-201ENST00000410517 106 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 MTND1P21-201ENST00000412991 285 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.65□□□□□ -2.15
FOXF1Q12946 AL139421.1-201ENST00000423010 169 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AC092047.1-201ENST00000424997 240 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.65□□□□□ -2.15
FOXF1Q12946 AL121890.1-201ENST00000435457 205 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.65□□□□□ -2.15
FOXF1Q12946 PIGFP3-201ENST00000441918 722 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AC010095.1-201ENST00000443543 144 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AC104563.1-201ENST00000476147 376 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.65□□□□□ -2.15
FOXF1Q12946 YWHAEP4-201ENST00000505390 198 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.65□□□□□ -2.15
FOXF1Q12946 NDUFB4P2-201ENST00000509515 391 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 MRPS36P2-201ENST00000512569 299 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 RNU6-714P-201ENST00000516963 103 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AC022634.1-201ENST00000520765 532 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.65□□□□□ -2.15
FOXF1Q12946 ATP5F1P5-201ENST00000526403 760 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.65□□□□□ -2.15
FOXF1Q12946 DEFB131D-201ENST00000526803 184 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.65□□□□□ -2.15
FOXF1Q12946 AK6P1-201ENST00000540219 478 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 TRAV28-201ENST00000557548 323 ntBASIC1.65□□□□□ -2.15
FOXF1Q12946 MTND3P13-201ENST00000574391 343 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms