Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.41□□□□□ -2.18
CPSF1Q10570 AC135279.1-201ENST00000543493 504 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.41□□□□□ -2.18
CPSF1Q10570 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.41□□□□□ -2.18
CPSF1Q10570 AC012254.4-201ENST00000588843 273 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 FAM60CP-201ENST00000591086 664 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF1Q10570 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.41□□□□□ -2.18
CPSF1Q10570 AC027309.3-201ENST00000623419 351 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 RNA5SP465-201ENST00000391195 109 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 CYCSP33-201ENST00000414485 327 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 SEPT2P1-201ENST00000419651 180 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.4□□□□□ -2.18
CPSF1Q10570 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.4□□□□□ -2.18
CPSF1Q10570 COX6CP18-201ENST00000448769 222 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 RPL21P134-201ENST00000453468 483 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 AC111193.1-201ENST00000504097 155 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.4□□□□□ -2.18
CPSF1Q10570 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.4□□□□□ -2.18
CPSF1Q10570 AC084033.1-201ENST00000550830 633 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 VN1R107P-201ENST00000601784 209 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.4□□□□□ -2.18
CPSF1Q10570 AC211469.2-201ENST00000605461 205 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CPSF1Q10570 AC004852.3-201ENST00000614131 326 ntBASIC1.4□□□□□ -2.18
CPSF1Q10570 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.4□□□□□ -2.19
CPSF1Q10570 AL133384.1-201ENST00000412744 351 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.4□□□□□ -2.19
CPSF1Q10570 AIMP1P2-201ENST00000425294 312 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 GDI2P2-201ENST00000445131 608 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF1Q10570 snoU13.28-201ENST00000459235 104 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 AC087588.1-201ENST00000462203 316 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.4□□□□□ -2.19
CPSF1Q10570 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF1Q10570 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF1Q10570 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF1Q10570 AP004247.1-201ENST00000531556 1289 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF1Q10570 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF1Q10570 AC090888.1-201ENST00000561335 1141 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 AL731537.2-201ENST00000561565 951 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 AL450336.1-201ENST00000605180 586 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 AL050343.2-201ENST00000607338 280 ntBASIC1.4□□□□□ -2.19
CPSF1Q10570 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.4□□□□□ -2.19
CPSF1Q10570 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.4□□□□□ -2.19
CPSF1Q10570 RNU6-1074P-201ENST00000383995 104 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 MIR767-201ENST00000390228 109 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF1Q10570 AC079780.1-201ENST00000428259 207 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF1Q10570 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF1Q10570 AC107032.1-201ENST00000485945 480 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 RPS23P4-201ENST00000487908 423 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.39□□□□□ -2.19
CPSF1Q10570 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF1Q10570 MRPS36P2-201ENST00000512569 299 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF1Q10570 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.39□□□□□ -2.19
CPSF1Q10570 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 FAM60BP-201ENST00000578364 658 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 AC005498.1-201ENST00000592125 465 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 AC025165.5-201ENST00000602802 578 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 AC103710.4-201ENST00000609301 899 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 AC092140.2-201ENST00000618027 521 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 AL445493.3-201ENST00000619568 477 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 MIR7515-201ENST00000637837 67 ntBASIC1.39□□□□□ -2.19
CPSF1Q10570 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CPSF1Q10570 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
CPSF1Q10570 RNU6-31P-201ENST00000384388 108 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
CPSF1Q10570 AL512604.1-201ENST00000404812 257 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.38□□□□□ -2.19
CPSF1Q10570 VN1R36P-201ENST00000414936 291 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF1Q10570 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.38□□□□□ -2.19
CPSF1Q10570 SDAD1P3-201ENST00000427380 333 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF1Q10570 USP12PX-201ENST00000432383 1057 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 AC055731.1-201ENST00000474387 401 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 AC113398.2-201ENST00000507630 558 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 AP005902.1-201ENST00000521358 186 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF1Q10570 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.38□□□□□ -2.19
CPSF1Q10570 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.38□□□□□ -2.19
CPSF1Q10570 MED28P6-201ENST00000558776 231 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 MIR5000-201ENST00000577717 103 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 AC111188.2-201ENST00000529697 1387 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 AC025263.3-201ENST00000622965 1396 ntBASIC1.38□□□□□ -2.19
CPSF1Q10570 DDX10P1-201ENST00000448545 1933 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 MIR532-201ENST00000385025 91 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 MIR513A1-201ENST00000385138 129 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 MIR147B-201ENST00000390185 80 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 TATDN1P1-201ENST00000414123 891 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF1Q10570 AC234781.2-201ENST00000426370 994 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.37□□□□□ -2.19
CPSF1Q10570 MTATP6P7-201ENST00000453315 681 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 AC087884.1-201ENST00000469738 328 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 TPT1P8-201ENST00000510120 555 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms